Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
PTPN6P29350 AC068587.6-202ENST00000641839 5619 ntBASIC14.84□□□□□ -0.03
PTPN6P29350 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.84□□□□□ -0.03
PTPN6P29350 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.84□□□□□ -0.03
PTPN6P29350 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.84□□□□□ -0.03
PTPN6P29350 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PTPN6P29350 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.84□□□□□ -0.03
PTPN6P29350 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
PTPN6P29350 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PTPN6P29350 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PTPN6P29350 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.84□□□□□ -0.03
PTPN6P29350 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PTPN6P29350 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
PTPN6P29350 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PTPN6P29350 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
PTPN6P29350 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PTPN6P29350 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
PTPN6P29350 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PTPN6P29350 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PTPN6P29350 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.84□□□□□ -0.03
PTPN6P29350 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PTPN6P29350 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.84□□□□□ -0.03
PTPN6P29350 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.84□□□□□ -0.03
PTPN6P29350 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.84□□□□□ -0.03
PTPN6P29350 AC125807.1-201ENST00000483097 614 ntBASIC14.84□□□□□ -0.03
PTPN6P29350 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.84□□□□□ -0.03
PTPN6P29350 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PTPN6P29350 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.84□□□□□ -0.03
PTPN6P29350 MIR4453-201ENST00000584019 89 ntBASIC14.84□□□□□ -0.03
PTPN6P29350 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
PTPN6P29350 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PTPN6P29350 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
PTPN6P29350 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PTPN6P29350 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PTPN6P29350 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PTPN6P29350 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PTPN6P29350 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PTPN6P29350 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
PTPN6P29350 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
PTPN6P29350 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PTPN6P29350 LINC00552-201ENST00000625151 2579 ntBASIC14.83□□□□□ -0.03
PTPN6P29350 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PTPN6P29350 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.83□□□□□ -0.03
PTPN6P29350 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PTPN6P29350 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
PTPN6P29350 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PTPN6P29350 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PTPN6P29350 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PTPN6P29350 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PTPN6P29350 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
PTPN6P29350 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PTPN6P29350 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PTPN6P29350 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PTPN6P29350 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PTPN6P29350 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
PTPN6P29350 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
PTPN6P29350 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
PTPN6P29350 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.83□□□□□ -0.04
PTPN6P29350 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PTPN6P29350 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
PTPN6P29350 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PTPN6P29350 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PTPN6P29350 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PTPN6P29350 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
PTPN6P29350 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PTPN6P29350 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PTPN6P29350 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PTPN6P29350 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
PTPN6P29350 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.83□□□□□ -0.04
PTPN6P29350 AC107890.1-201ENST00000422478 521 ntBASIC14.83□□□□□ -0.04
PTPN6P29350 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.83□□□□□ -0.04
PTPN6P29350 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.83□□□□□ -0.04
PTPN6P29350 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.83□□□□□ -0.04
PTPN6P29350 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PTPN6P29350 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.83□□□□□ -0.04
PTPN6P29350 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PTPN6P29350 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.83□□□□□ -0.04
PTPN6P29350 AC003101.2-201ENST00000612557 442 ntBASIC14.83□□□□□ -0.04
PTPN6P29350 AC007967.4-201ENST00000614700 386 ntBASIC14.83□□□□□ -0.04
PTPN6P29350 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PTPN6P29350 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
PTPN6P29350 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PTPN6P29350 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PTPN6P29350 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PTPN6P29350 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
PTPN6P29350 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
PTPN6P29350 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
PTPN6P29350 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
PTPN6P29350 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.83□□□□□ -0.04
PTPN6P29350 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
PTPN6P29350 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PTPN6P29350 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PTPN6P29350 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
PTPN6P29350 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PTPN6P29350 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.82□□□□□ -0.04
PTPN6P29350 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PTPN6P29350 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PTPN6P29350 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PTPN6P29350 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
PTPN6P29350 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms