Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH3P22223 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.4■□□□□ 0.06
CDH3P22223 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH3P22223 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH3P22223 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDH3P22223 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.4■□□□□ 0.06
CDH3P22223 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.4■□□□□ 0.06
CDH3P22223 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDH3P22223 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH3P22223 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.4■□□□□ 0.06
CDH3P22223 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH3P22223 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.4■□□□□ 0.06
CDH3P22223 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.4■□□□□ 0.06
CDH3P22223 AP001282.1-201ENST00000531301 1499 ntBASIC15.4■□□□□ 0.06
CDH3P22223 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH3P22223 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.39■□□□□ 0.05
CDH3P22223 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.39■□□□□ 0.05
CDH3P22223 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
CDH3P22223 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDH3P22223 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH3P22223 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.39■□□□□ 0.05
CDH3P22223 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDH3P22223 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH3P22223 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.39■□□□□ 0.05
CDH3P22223 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.39■□□□□ 0.05
CDH3P22223 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDH3P22223 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
CDH3P22223 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDH3P22223 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CDH3P22223 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CDH3P22223 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDH3P22223 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH3P22223 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.39■□□□□ 0.05
CDH3P22223 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.39■□□□□ 0.05
CDH3P22223 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC15.39■□□□□ 0.05
CDH3P22223 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CDH3P22223 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.39■□□□□ 0.05
CDH3P22223 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.39■□□□□ 0.05
CDH3P22223 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
CDH3P22223 AC104794.3-201ENST00000566840 1248 ntBASIC15.39■□□□□ 0.05
CDH3P22223 COX11-202ENST00000571584 1108 ntTSL 2 BASIC15.39■□□□□ 0.05
CDH3P22223 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC15.39■□□□□ 0.05
CDH3P22223 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.39■□□□□ 0.05
CDH3P22223 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.39■□□□□ 0.05
CDH3P22223 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH3P22223 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.39■□□□□ 0.05
CDH3P22223 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDH3P22223 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.39■□□□□ 0.05
CDH3P22223 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.39■□□□□ 0.05
CDH3P22223 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH3P22223 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDH3P22223 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH3P22223 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDH3P22223 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH3P22223 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH3P22223 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.39■□□□□ 0.05
CDH3P22223 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.39■□□□□ 0.05
CDH3P22223 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH3P22223 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH3P22223 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH3P22223 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH3P22223 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
CDH3P22223 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CDH3P22223 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CDH3P22223 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH3P22223 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CDH3P22223 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH3P22223 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH3P22223 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH3P22223 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH3P22223 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.38■□□□□ 0.05
CDH3P22223 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH3P22223 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH3P22223 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH3P22223 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
CDH3P22223 BNIP3P1-202ENST00000550043 1585 ntBASIC15.38■□□□□ 0.05
CDH3P22223 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH3P22223 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.38■□□□□ 0.05
CDH3P22223 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH3P22223 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CDH3P22223 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CDH3P22223 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH3P22223 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH3P22223 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.38■□□□□ 0.05
CDH3P22223 PIN1P1-201ENST00000412108 996 ntBASIC15.38■□□□□ 0.05
CDH3P22223 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC15.38■□□□□ 0.05
CDH3P22223 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.38■□□□□ 0.05
CDH3P22223 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.38■□□□□ 0.05
CDH3P22223 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.38■□□□□ 0.05
CDH3P22223 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.38■□□□□ 0.05
CDH3P22223 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.38■□□□□ 0.05
CDH3P22223 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH3P22223 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
CDH3P22223 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH3P22223 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.38■□□□□ 0.05
CDH3P22223 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.38■□□□□ 0.05
CDH3P22223 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH3P22223 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH3P22223 AC134407.2-201ENST00000625089 1978 ntBASIC15.38■□□□□ 0.05
CDH3P22223 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms