Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TNFRSF1BP20333 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TNFRSF1BP20333 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TNFRSF1BP20333 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TNFRSF1BP20333 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TNFRSF1BP20333 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TNFRSF1BP20333 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.56□□□□□ -0.08
TNFRSF1BP20333 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TNFRSF1BP20333 AL390755.1-201ENST00000623716 2027 ntBASIC14.56□□□□□ -0.08
TNFRSF1BP20333 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TNFRSF1BP20333 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TNFRSF1BP20333 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TNFRSF1BP20333 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.56□□□□□ -0.08
TNFRSF1BP20333 AC007191.1-201ENST00000623179 2995 ntBASIC14.55□□□□□ -0.08
TNFRSF1BP20333 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TNFRSF1BP20333 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TNFRSF1BP20333 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.55□□□□□ -0.08
TNFRSF1BP20333 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TNFRSF1BP20333 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TNFRSF1BP20333 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TNFRSF1BP20333 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
TNFRSF1BP20333 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.55□□□□□ -0.08
TNFRSF1BP20333 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TNFRSF1BP20333 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.55□□□□□ -0.08
TNFRSF1BP20333 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TNFRSF1BP20333 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
TNFRSF1BP20333 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TNFRSF1BP20333 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TNFRSF1BP20333 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TNFRSF1BP20333 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TNFRSF1BP20333 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC14.55□□□□□ -0.08
TNFRSF1BP20333 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.55□□□□□ -0.08
TNFRSF1BP20333 NMU-202ENST00000505262 693 ntTSL 3 BASIC14.55□□□□□ -0.08
TNFRSF1BP20333 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.55□□□□□ -0.08
TNFRSF1BP20333 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.55□□□□□ -0.08
TNFRSF1BP20333 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.55□□□□□ -0.08
TNFRSF1BP20333 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TNFRSF1BP20333 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.55□□□□□ -0.08
TNFRSF1BP20333 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.55□□□□□ -0.08
TNFRSF1BP20333 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TNFRSF1BP20333 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TNFRSF1BP20333 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.55□□□□□ -0.08
TNFRSF1BP20333 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.55□□□□□ -0.08
TNFRSF1BP20333 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TNFRSF1BP20333 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
TNFRSF1BP20333 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
TNFRSF1BP20333 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TNFRSF1BP20333 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TNFRSF1BP20333 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TNFRSF1BP20333 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TNFRSF1BP20333 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.55□□□□□ -0.08
TNFRSF1BP20333 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TNFRSF1BP20333 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.55□□□□□ -0.08
TNFRSF1BP20333 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
TNFRSF1BP20333 ZBED1P1-201ENST00000502364 1930 ntBASIC14.54□□□□□ -0.08
TNFRSF1BP20333 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TNFRSF1BP20333 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TNFRSF1BP20333 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TNFRSF1BP20333 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.54□□□□□ -0.08
TNFRSF1BP20333 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.54□□□□□ -0.08
TNFRSF1BP20333 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TNFRSF1BP20333 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TNFRSF1BP20333 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.54□□□□□ -0.08
TNFRSF1BP20333 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TNFRSF1BP20333 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.54□□□□□ -0.08
TNFRSF1BP20333 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
TNFRSF1BP20333 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TNFRSF1BP20333 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TNFRSF1BP20333 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
TNFRSF1BP20333 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TNFRSF1BP20333 YBX2P1-201ENST00000394192 760 ntBASIC14.54□□□□□ -0.08
TNFRSF1BP20333 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.54□□□□□ -0.08
TNFRSF1BP20333 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.54□□□□□ -0.08
TNFRSF1BP20333 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.54□□□□□ -0.08
TNFRSF1BP20333 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.54□□□□□ -0.08
TNFRSF1BP20333 RARRES2P9-201ENST00000565168 469 ntBASIC14.54□□□□□ -0.08
TNFRSF1BP20333 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.54□□□□□ -0.08
TNFRSF1BP20333 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.54□□□□□ -0.08
TNFRSF1BP20333 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TNFRSF1BP20333 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TNFRSF1BP20333 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
TNFRSF1BP20333 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.54□□□□□ -0.08
TNFRSF1BP20333 MYO15B-237ENST00000642007 4893 ntBASIC14.54□□□□□ -0.08
TNFRSF1BP20333 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
TNFRSF1BP20333 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TNFRSF1BP20333 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TNFRSF1BP20333 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TNFRSF1BP20333 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TNFRSF1BP20333 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TNFRSF1BP20333 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TNFRSF1BP20333 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.54□□□□□ -0.08
TNFRSF1BP20333 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.54□□□□□ -0.08
TNFRSF1BP20333 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
TNFRSF1BP20333 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TNFRSF1BP20333 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TNFRSF1BP20333 AC005912.2-201ENST00000619492 2400 ntBASIC14.54□□□□□ -0.08
TNFRSF1BP20333 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TNFRSF1BP20333 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TNFRSF1BP20333 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TNFRSF1BP20333 AL365209.1-201ENST00000624418 6473 ntBASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms