Protein–RNA interactions for Protein: P13521

SCG2, Secretogranin-2, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2P13521 AC007431.3-201ENST00000623221 587 ntBASIC17.92■□□□□ 0.46
SCG2P13521 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC17.92■□□□□ 0.46
SCG2P13521 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC17.92■□□□□ 0.46
SCG2P13521 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.92■□□□□ 0.46
SCG2P13521 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC17.92■□□□□ 0.46
SCG2P13521 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SCG2P13521 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SCG2P13521 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
SCG2P13521 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
SCG2P13521 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SCG2P13521 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC17.92■□□□□ 0.46
SCG2P13521 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SCG2P13521 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.92■□□□□ 0.46
SCG2P13521 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SCG2P13521 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCG2P13521 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCG2P13521 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCG2P13521 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
SCG2P13521 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC17.91■□□□□ 0.46
SCG2P13521 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC17.91■□□□□ 0.46
SCG2P13521 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCG2P13521 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCG2P13521 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
SCG2P13521 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SCG2P13521 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCG2P13521 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
SCG2P13521 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCG2P13521 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
SCG2P13521 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SCG2P13521 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC17.91■□□□□ 0.46
SCG2P13521 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCG2P13521 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC17.91■□□□□ 0.46
SCG2P13521 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SCG2P13521 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC17.91■□□□□ 0.46
SCG2P13521 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SCG2P13521 AC104596.2-201ENST00000512793 793 ntBASIC17.91■□□□□ 0.46
SCG2P13521 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
SCG2P13521 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC17.91■□□□□ 0.46
SCG2P13521 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
SCG2P13521 AL049840.4-201ENST00000602422 811 ntBASIC17.91■□□□□ 0.46
SCG2P13521 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SCG2P13521 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC17.91■□□□□ 0.46
SCG2P13521 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SCG2P13521 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCG2P13521 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCG2P13521 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SCG2P13521 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SCG2P13521 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCG2P13521 STRN-202ENST00000379213 2254 ntTSL 5 BASIC17.91■□□□□ 0.46
SCG2P13521 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC17.91■□□□□ 0.46
SCG2P13521 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SCG2P13521 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC17.91■□□□□ 0.46
SCG2P13521 AC138035.3-201ENST00000622706 2791 ntBASIC17.91■□□□□ 0.46
SCG2P13521 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC17.91■□□□□ 0.46
SCG2P13521 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
SCG2P13521 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.9■□□□□ 0.46
SCG2P13521 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
SCG2P13521 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
SCG2P13521 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCG2P13521 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SCG2P13521 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC17.9■□□□□ 0.46
SCG2P13521 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SCG2P13521 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCG2P13521 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC17.9■□□□□ 0.46
SCG2P13521 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC17.9■□□□□ 0.46
SCG2P13521 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SCG2P13521 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCG2P13521 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SCG2P13521 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
SCG2P13521 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCG2P13521 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCG2P13521 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCG2P13521 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SCG2P13521 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC17.9■□□□□ 0.46
SCG2P13521 MYCLP2-201ENST00000449268 967 ntBASIC17.9■□□□□ 0.46
SCG2P13521 GAPDHP40-201ENST00000505218 1006 ntBASIC17.9■□□□□ 0.46
SCG2P13521 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC17.9■□□□□ 0.46
SCG2P13521 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC17.9■□□□□ 0.46
SCG2P13521 AC140912.1-201ENST00000577171 1054 ntBASIC17.9■□□□□ 0.46
SCG2P13521 AC008494.3-201ENST00000606615 944 ntBASIC17.9■□□□□ 0.46
SCG2P13521 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SCG2P13521 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCG2P13521 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SCG2P13521 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCG2P13521 AL109954.1-202ENST00000564051 2148 ntBASIC17.9■□□□□ 0.46
SCG2P13521 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCG2P13521 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.9■□□□□ 0.46
SCG2P13521 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC17.9■□□□□ 0.46
SCG2P13521 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC17.9■□□□□ 0.46
SCG2P13521 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCG2P13521 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.9■□□□□ 0.46
SCG2P13521 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCG2P13521 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
SCG2P13521 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCG2P13521 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SCG2P13521 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SCG2P13521 CICP11-201ENST00000434745 2827 ntBASIC17.9■□□□□ 0.46
SCG2P13521 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
SCG2P13521 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.46
SCG2P13521 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms