Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC12.79□□□□□ -0.36
DEFA4P12838 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC12.79□□□□□ -0.36
DEFA4P12838 POLL-217ENST00000628479 1953 ntTSL 5 BASIC12.79□□□□□ -0.36
DEFA4P12838 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DEFA4P12838 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DEFA4P12838 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC12.79□□□□□ -0.36
DEFA4P12838 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DEFA4P12838 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC12.79□□□□□ -0.36
DEFA4P12838 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
DEFA4P12838 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
DEFA4P12838 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
DEFA4P12838 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC12.79□□□□□ -0.36
DEFA4P12838 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC12.79□□□□□ -0.36
DEFA4P12838 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC12.79□□□□□ -0.36
DEFA4P12838 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC12.79□□□□□ -0.36
DEFA4P12838 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DEFA4P12838 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DEFA4P12838 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC12.79□□□□□ -0.36
DEFA4P12838 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DEFA4P12838 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
DEFA4P12838 UCKL1-AS1-201ENST00000623569 3602 ntBASIC12.79□□□□□ -0.36
DEFA4P12838 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DEFA4P12838 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
DEFA4P12838 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC12.78□□□□□ -0.36
DEFA4P12838 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DEFA4P12838 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DEFA4P12838 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC12.78□□□□□ -0.36
DEFA4P12838 AC087481.3-201ENST00000602886 1894 ntBASIC12.78□□□□□ -0.36
DEFA4P12838 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
DEFA4P12838 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC12.78□□□□□ -0.36
DEFA4P12838 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DEFA4P12838 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
DEFA4P12838 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DEFA4P12838 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DEFA4P12838 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DEFA4P12838 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
DEFA4P12838 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
DEFA4P12838 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DEFA4P12838 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
DEFA4P12838 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DEFA4P12838 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC12.78□□□□□ -0.36
DEFA4P12838 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
DEFA4P12838 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC12.78□□□□□ -0.36
DEFA4P12838 TFAMP1-201ENST00000412727 736 ntBASIC12.78□□□□□ -0.36
DEFA4P12838 SPDYE11-202ENST00000450699 704 ntBASIC12.78□□□□□ -0.36
DEFA4P12838 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
DEFA4P12838 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC12.78□□□□□ -0.36
DEFA4P12838 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC12.78□□□□□ -0.36
DEFA4P12838 AC098859.1-201ENST00000502915 1238 ntBASIC12.78□□□□□ -0.36
DEFA4P12838 AL135744.1-201ENST00000565098 629 ntBASIC12.78□□□□□ -0.36
DEFA4P12838 SPDYE9P-201ENST00000570642 692 ntBASIC12.78□□□□□ -0.36
DEFA4P12838 MIR4321-201ENST00000592276 80 ntBASIC12.78□□□□□ -0.36
DEFA4P12838 SPDYE10P-202ENST00000612005 668 ntBASIC12.78□□□□□ -0.36
DEFA4P12838 SPDYE8P-202ENST00000612377 668 ntBASIC12.78□□□□□ -0.36
DEFA4P12838 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC12.78□□□□□ -0.36
DEFA4P12838 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DEFA4P12838 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC12.78□□□□□ -0.36
DEFA4P12838 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
DEFA4P12838 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC12.78□□□□□ -0.36
DEFA4P12838 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
DEFA4P12838 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
DEFA4P12838 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC12.78□□□□□ -0.36
DEFA4P12838 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DEFA4P12838 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DEFA4P12838 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DEFA4P12838 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
DEFA4P12838 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
DEFA4P12838 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC12.78□□□□□ -0.36
DEFA4P12838 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
DEFA4P12838 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
DEFA4P12838 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
DEFA4P12838 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC12.78□□□□□ -0.36
DEFA4P12838 AC104581.4-201ENST00000623126 3052 ntBASIC12.77□□□□□ -0.36
DEFA4P12838 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC12.77□□□□□ -0.36
DEFA4P12838 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
DEFA4P12838 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
DEFA4P12838 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
DEFA4P12838 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
DEFA4P12838 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
DEFA4P12838 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC12.77□□□□□ -0.36
DEFA4P12838 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
DEFA4P12838 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
DEFA4P12838 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
DEFA4P12838 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC12.77□□□□□ -0.36
DEFA4P12838 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
DEFA4P12838 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
DEFA4P12838 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
DEFA4P12838 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
DEFA4P12838 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC12.77□□□□□ -0.37
DEFA4P12838 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC12.77□□□□□ -0.37
DEFA4P12838 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
DEFA4P12838 POR-201ENST00000394893 2532 ntTSL 5 BASIC12.77□□□□□ -0.37
DEFA4P12838 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
DEFA4P12838 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
DEFA4P12838 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC12.77□□□□□ -0.37
DEFA4P12838 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
DEFA4P12838 AL022342.1-201ENST00000400363 863 ntBASIC12.77□□□□□ -0.37
DEFA4P12838 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC12.77□□□□□ -0.37
DEFA4P12838 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
DEFA4P12838 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms