Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.1■□□□□ 0.01
SP9P0CG40 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SP9P0CG40 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
SP9P0CG40 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SP9P0CG40 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.1■□□□□ 0.01
SP9P0CG40 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SP9P0CG40 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SP9P0CG40 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SP9P0CG40 FAM90A2P-201ENST00000511144 1395 ntBASIC15.1■□□□□ 0.01
SP9P0CG40 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.1■□□□□ 0.01
SP9P0CG40 FAM90A25P-201ENST00000528404 1395 ntBASIC15.1■□□□□ 0.01
SP9P0CG40 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SP9P0CG40 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
SP9P0CG40 AP000593.2-201ENST00000542775 1433 ntBASIC15.09■□□□□ 0.01
SP9P0CG40 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC15.09■□□□□ 0.01
SP9P0CG40 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SP9P0CG40 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
SP9P0CG40 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SP9P0CG40 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
SP9P0CG40 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SP9P0CG40 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SP9P0CG40 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC15.09■□□□□ 0.01
SP9P0CG40 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SP9P0CG40 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC15.09■□□□□ 0.01
SP9P0CG40 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
SP9P0CG40 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC15.09■□□□□ 0.01
SP9P0CG40 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SP9P0CG40 DUX4L46-201ENST00000566845 751 ntBASIC15.09■□□□□ 0.01
SP9P0CG40 AC026803.1-201ENST00000569130 274 ntBASIC15.09■□□□□ 0.01
SP9P0CG40 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC15.09■□□□□ 0.01
SP9P0CG40 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC15.09■□□□□ 0.01
SP9P0CG40 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
SP9P0CG40 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
SP9P0CG40 AC007881.3-201ENST00000608897 607 ntBASIC15.09■□□□□ 0.01
SP9P0CG40 RNF146-211ENST00000609447 607 ntTSL 4 BASIC15.09■□□□□ 0.01
SP9P0CG40 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SP9P0CG40 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
SP9P0CG40 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC15.09■□□□□ 0.01
SP9P0CG40 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SP9P0CG40 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.09■□□□□ 0.01
SP9P0CG40 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.09■□□□□ 0.01
SP9P0CG40 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SP9P0CG40 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
SP9P0CG40 CAP2P1-201ENST00000557743 1390 ntBASIC15.09■□□□□ 0.01
SP9P0CG40 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SP9P0CG40 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SP9P0CG40 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
SP9P0CG40 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SP9P0CG40 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SP9P0CG40 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.08■□□□□ 0.01
SP9P0CG40 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.08■□□□□ 0.01
SP9P0CG40 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC15.08■□□□□ 0.01
SP9P0CG40 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SP9P0CG40 AR-207ENST00000612010 3896 ntTSL 5 BASIC15.08■□□□□ 0.01
SP9P0CG40 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
SP9P0CG40 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SP9P0CG40 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC15.08■□□□□ 0
SP9P0CG40 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.08■□□□□ 0
SP9P0CG40 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
SP9P0CG40 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
SP9P0CG40 ME2P1-201ENST00000426028 1970 ntBASIC15.08■□□□□ 0
SP9P0CG40 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
SP9P0CG40 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SP9P0CG40 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SP9P0CG40 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
SP9P0CG40 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC15.08■□□□□ 0
SP9P0CG40 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC15.08■□□□□ 0
SP9P0CG40 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC15.08■□□□□ 0
SP9P0CG40 IDS-203ENST00000428056 1213 ntTSL 2 BASIC15.08■□□□□ 0
SP9P0CG40 RPL8P2-201ENST00000430538 502 ntBASIC15.08■□□□□ 0
SP9P0CG40 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC15.08■□□□□ 0
SP9P0CG40 VDAC1P1-201ENST00000439229 848 ntBASIC15.08■□□□□ 0
SP9P0CG40 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC15.08■□□□□ 0
SP9P0CG40 NAGK-204ENST00000443872 878 ntTSL 3 BASIC15.08■□□□□ 0
SP9P0CG40 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC15.08■□□□□ 0
SP9P0CG40 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC15.08■□□□□ 0
SP9P0CG40 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC15.08■□□□□ 0
SP9P0CG40 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.08■□□□□ 0
SP9P0CG40 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.08■□□□□ 0
SP9P0CG40 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC15.08■□□□□ 0
SP9P0CG40 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.08■□□□□ 0
SP9P0CG40 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
SP9P0CG40 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC15.08■□□□□ 0
SP9P0CG40 AC008805.1-201ENST00000590892 364 ntBASIC15.08■□□□□ 0
SP9P0CG40 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC15.08■□□□□ 0
SP9P0CG40 AC148477.9-201ENST00000623974 539 ntBASIC15.08■□□□□ 0
SP9P0CG40 AC002472.3-201ENST00000640124 621 ntBASIC15.08■□□□□ 0
SP9P0CG40 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.08■□□□□ 0
SP9P0CG40 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.08■□□□□ 0
SP9P0CG40 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SP9P0CG40 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
SP9P0CG40 SHC1P1-201ENST00000425230 1745 ntBASIC15.08■□□□□ 0
SP9P0CG40 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
SP9P0CG40 E2F3P2-201ENST00000447755 1422 ntBASIC15.08■□□□□ 0
SP9P0CG40 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
SP9P0CG40 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SP9P0CG40 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.08■□□□□ 0
SP9P0CG40 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
SP9P0CG40 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
SP9P0CG40 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms