Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HOXC6P09630 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HOXC6P09630 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
HOXC6P09630 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HOXC6P09630 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
HOXC6P09630 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
HOXC6P09630 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HOXC6P09630 AC124067.4-201ENST00000519691 2379 ntBASIC17.46■□□□□ 0.39
HOXC6P09630 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.46■□□□□ 0.39
HOXC6P09630 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
HOXC6P09630 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.46■□□□□ 0.39
HOXC6P09630 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HOXC6P09630 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
HOXC6P09630 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HOXC6P09630 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HOXC6P09630 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.46■□□□□ 0.39
HOXC6P09630 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
HOXC6P09630 KRT8P19-201ENST00000551916 1455 ntBASIC17.46■□□□□ 0.39
HOXC6P09630 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
HOXC6P09630 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
HOXC6P09630 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HOXC6P09630 TISP43-201ENST00000409793 538 ntTSL 4 BASIC17.46■□□□□ 0.39
HOXC6P09630 KRTAP19-9P-201ENST00000421795 191 ntBASIC17.46■□□□□ 0.39
HOXC6P09630 AC016700.1-201ENST00000429424 312 ntBASIC17.46■□□□□ 0.39
HOXC6P09630 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC17.46■□□□□ 0.39
HOXC6P09630 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC17.46■□□□□ 0.39
HOXC6P09630 EIF4HP1-201ENST00000453115 687 ntBASIC17.46■□□□□ 0.39
HOXC6P09630 RN7SL769P-201ENST00000469386 295 ntBASIC17.46■□□□□ 0.39
HOXC6P09630 ATP6V0CP2-201ENST00000469409 207 ntBASIC17.46■□□□□ 0.39
HOXC6P09630 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC17.46■□□□□ 0.39
HOXC6P09630 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC17.46■□□□□ 0.39
HOXC6P09630 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HOXC6P09630 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HOXC6P09630 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
HOXC6P09630 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HOXC6P09630 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
HOXC6P09630 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
HOXC6P09630 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HOXC6P09630 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HOXC6P09630 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
HOXC6P09630 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
HOXC6P09630 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HOXC6P09630 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HOXC6P09630 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.45■□□□□ 0.38
HOXC6P09630 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
HOXC6P09630 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
HOXC6P09630 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HOXC6P09630 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HOXC6P09630 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HOXC6P09630 SMS-201ENST00000379404 1174 ntTSL 3 BASIC17.45■□□□□ 0.38
HOXC6P09630 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HOXC6P09630 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC17.45■□□□□ 0.38
HOXC6P09630 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HOXC6P09630 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC17.45■□□□□ 0.38
HOXC6P09630 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC17.45■□□□□ 0.38
HOXC6P09630 TSACC-208ENST00000481479 741 ntTSL 2 BASIC17.45■□□□□ 0.38
HOXC6P09630 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC17.45■□□□□ 0.38
HOXC6P09630 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC17.45■□□□□ 0.38
HOXC6P09630 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC17.45■□□□□ 0.38
HOXC6P09630 HCG18-245ENST00000602550 559 ntTSL 4 BASIC17.45■□□□□ 0.38
HOXC6P09630 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
HOXC6P09630 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
HOXC6P09630 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
HOXC6P09630 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
HOXC6P09630 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC17.45■□□□□ 0.38
HOXC6P09630 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.45■□□□□ 0.38
HOXC6P09630 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HOXC6P09630 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
HOXC6P09630 KRT8P14-201ENST00000414254 1442 ntBASIC17.45■□□□□ 0.38
HOXC6P09630 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HOXC6P09630 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HOXC6P09630 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HOXC6P09630 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HOXC6P09630 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
HOXC6P09630 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.44■□□□□ 0.38
HOXC6P09630 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HOXC6P09630 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.44■□□□□ 0.38
HOXC6P09630 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HOXC6P09630 LRRC59-203ENST00000576448 1531 ntBASIC17.44■□□□□ 0.38
HOXC6P09630 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HOXC6P09630 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
HOXC6P09630 LSM5-207ENST00000410044 687 ntTSL 3 BASIC17.44■□□□□ 0.38
HOXC6P09630 HNRNPA1P63-201ENST00000427917 963 ntBASIC17.44■□□□□ 0.38
HOXC6P09630 FAM8A4P-201ENST00000435433 1213 ntBASIC17.44■□□□□ 0.38
HOXC6P09630 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC17.44■□□□□ 0.38
HOXC6P09630 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
HOXC6P09630 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HOXC6P09630 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC17.44■□□□□ 0.38
HOXC6P09630 COX5BP1-201ENST00000507622 393 ntBASIC17.44■□□□□ 0.38
HOXC6P09630 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC17.44■□□□□ 0.38
HOXC6P09630 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC17.44■□□□□ 0.38
HOXC6P09630 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC17.44■□□□□ 0.38
HOXC6P09630 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC17.44■□□□□ 0.38
HOXC6P09630 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HOXC6P09630 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HOXC6P09630 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.44■□□□□ 0.38
HOXC6P09630 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HOXC6P09630 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HOXC6P09630 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.44■□□□□ 0.38
HOXC6P09630 AC007787.1-201ENST00000588095 1583 ntBASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms