Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC16■□□□□ 0.15
MT-ND3P03897 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
MT-ND3P03897 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16■□□□□ 0.15
MT-ND3P03897 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC16■□□□□ 0.15
MT-ND3P03897 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
MT-ND3P03897 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16■□□□□ 0.15
MT-ND3P03897 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
MT-ND3P03897 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
MT-ND3P03897 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
MT-ND3P03897 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
MT-ND3P03897 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC16■□□□□ 0.15
MT-ND3P03897 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16■□□□□ 0.15
MT-ND3P03897 AL139400.1-201ENST00000366220 510 ntBASIC16■□□□□ 0.15
MT-ND3P03897 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
MT-ND3P03897 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16■□□□□ 0.15
MT-ND3P03897 TFAMP1-201ENST00000412727 736 ntBASIC16■□□□□ 0.15
MT-ND3P03897 AL627223.1-201ENST00000416693 442 ntBASIC16■□□□□ 0.15
MT-ND3P03897 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16■□□□□ 0.15
MT-ND3P03897 AC005237.2-201ENST00000434368 219 ntBASIC16■□□□□ 0.15
MT-ND3P03897 PRYP6-201ENST00000514804 343 ntBASIC16■□□□□ 0.15
MT-ND3P03897 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16■□□□□ 0.15
MT-ND3P03897 MIR3197-201ENST00000582241 73 ntBASIC16■□□□□ 0.15
MT-ND3P03897 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16■□□□□ 0.15
MT-ND3P03897 AC092364.2-202ENST00000597012 1073 ntBASIC16■□□□□ 0.15
MT-ND3P03897 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16■□□□□ 0.15
MT-ND3P03897 AC099522.2-201ENST00000607001 744 ntBASIC16■□□□□ 0.15
MT-ND3P03897 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
MT-ND3P03897 AC009093.7-201ENST00000623853 1223 ntBASIC16■□□□□ 0.15
MT-ND3P03897 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
MT-ND3P03897 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16■□□□□ 0.15
MT-ND3P03897 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
MT-ND3P03897 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
MT-ND3P03897 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC16■□□□□ 0.15
MT-ND3P03897 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
MT-ND3P03897 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
MT-ND3P03897 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16■□□□□ 0.15
MT-ND3P03897 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16■□□□□ 0.15
MT-ND3P03897 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.99■□□□□ 0.15
MT-ND3P03897 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
MT-ND3P03897 AC126365.1-201ENST00000578585 1514 ntBASIC15.99■□□□□ 0.15
MT-ND3P03897 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
MT-ND3P03897 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
MT-ND3P03897 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
MT-ND3P03897 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
MT-ND3P03897 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.99■□□□□ 0.15
MT-ND3P03897 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
MT-ND3P03897 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.99■□□□□ 0.15
MT-ND3P03897 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
MT-ND3P03897 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
MT-ND3P03897 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC15.99■□□□□ 0.15
MT-ND3P03897 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
MT-ND3P03897 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.99■□□□□ 0.15
MT-ND3P03897 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
MT-ND3P03897 AL592309.1-201ENST00000443127 649 ntBASIC15.99■□□□□ 0.15
MT-ND3P03897 FAM86GP-201ENST00000448322 971 ntBASIC15.99■□□□□ 0.15
MT-ND3P03897 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.99■□□□□ 0.15
MT-ND3P03897 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.99■□□□□ 0.15
MT-ND3P03897 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.99■□□□□ 0.15
MT-ND3P03897 AC243562.2-201ENST00000561247 970 ntBASIC15.99■□□□□ 0.15
MT-ND3P03897 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.99■□□□□ 0.15
MT-ND3P03897 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
MT-ND3P03897 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.99■□□□□ 0.15
MT-ND3P03897 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
MT-ND3P03897 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
MT-ND3P03897 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
MT-ND3P03897 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.99■□□□□ 0.15
MT-ND3P03897 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
MT-ND3P03897 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
MT-ND3P03897 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
MT-ND3P03897 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.99■□□□□ 0.15
MT-ND3P03897 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
MT-ND3P03897 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
MT-ND3P03897 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.99■□□□□ 0.15
MT-ND3P03897 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
MT-ND3P03897 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
MT-ND3P03897 AC127383.1-201ENST00000444697 1800 ntBASIC15.98■□□□□ 0.15
MT-ND3P03897 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
MT-ND3P03897 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
MT-ND3P03897 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
MT-ND3P03897 AC023908.3-201ENST00000564211 3047 ntBASIC15.98■□□□□ 0.15
MT-ND3P03897 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.98■□□□□ 0.15
MT-ND3P03897 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
MT-ND3P03897 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.98■□□□□ 0.15
MT-ND3P03897 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.98■□□□□ 0.15
MT-ND3P03897 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.98■□□□□ 0.15
MT-ND3P03897 SNX18-202ENST00000343017 3140 ntBASIC15.98■□□□□ 0.15
MT-ND3P03897 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MT-ND3P03897 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
MT-ND3P03897 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MT-ND3P03897 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MT-ND3P03897 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MT-ND3P03897 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MT-ND3P03897 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
MT-ND3P03897 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
MT-ND3P03897 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.98■□□□□ 0.15
MT-ND3P03897 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
MT-ND3P03897 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
MT-ND3P03897 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.98■□□□□ 0.15
MT-ND3P03897 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
MT-ND3P03897 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms