Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC14.82□□□□□ -0.04
MT-ND1P03886 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC14.82□□□□□ -0.04
MT-ND1P03886 AC145285.3-201ENST00000564603 959 ntBASIC14.82□□□□□ -0.04
MT-ND1P03886 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC14.82□□□□□ -0.04
MT-ND1P03886 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.82□□□□□ -0.04
MT-ND1P03886 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
MT-ND1P03886 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
MT-ND1P03886 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MT-ND1P03886 PMS2P7-201ENST00000506558 1336 ntBASIC14.82□□□□□ -0.04
MT-ND1P03886 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
MT-ND1P03886 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
MT-ND1P03886 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MT-ND1P03886 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.82□□□□□ -0.04
MT-ND1P03886 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MT-ND1P03886 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MT-ND1P03886 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MT-ND1P03886 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MT-ND1P03886 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.82□□□□□ -0.04
MT-ND1P03886 AC025580.3-201ENST00000617932 1424 ntBASIC14.82□□□□□ -0.04
MT-ND1P03886 AC041040.2-201ENST00000622926 2899 ntBASIC14.82□□□□□ -0.04
MT-ND1P03886 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
MT-ND1P03886 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
MT-ND1P03886 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
MT-ND1P03886 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
MT-ND1P03886 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
MT-ND1P03886 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MT-ND1P03886 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MT-ND1P03886 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MT-ND1P03886 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.82□□□□□ -0.04
MT-ND1P03886 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.82□□□□□ -0.04
MT-ND1P03886 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MT-ND1P03886 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
MT-ND1P03886 MROH4P-201ENST00000431302 1578 ntBASIC14.81□□□□□ -0.04
MT-ND1P03886 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
MT-ND1P03886 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MT-ND1P03886 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MT-ND1P03886 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.81□□□□□ -0.04
MT-ND1P03886 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MT-ND1P03886 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
MT-ND1P03886 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MT-ND1P03886 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
MT-ND1P03886 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MT-ND1P03886 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
MT-ND1P03886 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
MT-ND1P03886 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.81□□□□□ -0.04
MT-ND1P03886 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MT-ND1P03886 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
MT-ND1P03886 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
MT-ND1P03886 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
MT-ND1P03886 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
MT-ND1P03886 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.81□□□□□ -0.04
MT-ND1P03886 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
MT-ND1P03886 CRCP-205ENST00000431089 942 ntTSL 2 BASIC14.81□□□□□ -0.04
MT-ND1P03886 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.81□□□□□ -0.04
MT-ND1P03886 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.81□□□□□ -0.04
MT-ND1P03886 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.81□□□□□ -0.04
MT-ND1P03886 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
MT-ND1P03886 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC14.81□□□□□ -0.04
MT-ND1P03886 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
MT-ND1P03886 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC14.81□□□□□ -0.04
MT-ND1P03886 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.81□□□□□ -0.04
MT-ND1P03886 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MT-ND1P03886 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
MT-ND1P03886 AC004877.2-201ENST00000623941 599 ntBASIC14.81□□□□□ -0.04
MT-ND1P03886 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
MT-ND1P03886 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
MT-ND1P03886 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.81□□□□□ -0.04
MT-ND1P03886 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.81□□□□□ -0.04
MT-ND1P03886 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.81□□□□□ -0.04
MT-ND1P03886 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MT-ND1P03886 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
MT-ND1P03886 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
MT-ND1P03886 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MT-ND1P03886 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.81□□□□□ -0.04
MT-ND1P03886 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MT-ND1P03886 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
MT-ND1P03886 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MT-ND1P03886 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
MT-ND1P03886 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
MT-ND1P03886 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
MT-ND1P03886 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.81□□□□□ -0.04
MT-ND1P03886 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
MT-ND1P03886 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MT-ND1P03886 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MT-ND1P03886 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
MT-ND1P03886 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.81□□□□□ -0.04
MT-ND1P03886 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MT-ND1P03886 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
MT-ND1P03886 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
MT-ND1P03886 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
MT-ND1P03886 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MT-ND1P03886 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
MT-ND1P03886 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MT-ND1P03886 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
MT-ND1P03886 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
MT-ND1P03886 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
MT-ND1P03886 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
MT-ND1P03886 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.8□□□□□ -0.04
MT-ND1P03886 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
MT-ND1P03886 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms