Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LTAP01374 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC11.79□□□□□ -0.52
LTAP01374 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC11.79□□□□□ -0.52
LTAP01374 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LTAP01374 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
LTAP01374 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LTAP01374 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
LTAP01374 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC11.79□□□□□ -0.52
LTAP01374 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
LTAP01374 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
LTAP01374 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
LTAP01374 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LTAP01374 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
LTAP01374 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
LTAP01374 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC11.79□□□□□ -0.52
LTAP01374 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LTAP01374 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
LTAP01374 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
LTAP01374 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC11.79□□□□□ -0.52
LTAP01374 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
LTAP01374 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC11.79□□□□□ -0.52
LTAP01374 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC11.79□□□□□ -0.52
LTAP01374 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC11.79□□□□□ -0.52
LTAP01374 RHOQP3-201ENST00000437982 621 ntBASIC11.79□□□□□ -0.52
LTAP01374 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC11.79□□□□□ -0.52
LTAP01374 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC11.79□□□□□ -0.52
LTAP01374 AC096734.2-201ENST00000562054 433 ntBASIC11.79□□□□□ -0.52
LTAP01374 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC11.79□□□□□ -0.52
LTAP01374 TCAP-202ENST00000578283 583 ntTSL 5 BASIC11.79□□□□□ -0.52
LTAP01374 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC11.79□□□□□ -0.52
LTAP01374 AC097359.3-201ENST00000603982 1210 ntBASIC11.79□□□□□ -0.52
LTAP01374 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC11.79□□□□□ -0.52
LTAP01374 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
LTAP01374 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
LTAP01374 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
LTAP01374 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
LTAP01374 AC113367.3-201ENST00000508316 1912 ntBASIC11.79□□□□□ -0.52
LTAP01374 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC11.79□□□□□ -0.52
LTAP01374 MTHFR-210ENST00000641407 2387 ntBASIC11.79□□□□□ -0.52
LTAP01374 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
LTAP01374 CICP11-201ENST00000434745 2827 ntBASIC11.79□□□□□ -0.52
LTAP01374 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
LTAP01374 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
LTAP01374 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LTAP01374 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LTAP01374 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
LTAP01374 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
LTAP01374 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LTAP01374 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
LTAP01374 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC11.79□□□□□ -0.52
LTAP01374 AC084364.1-201ENST00000551967 1556 ntBASIC11.79□□□□□ -0.52
LTAP01374 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
LTAP01374 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LTAP01374 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LTAP01374 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
LTAP01374 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC11.79□□□□□ -0.52
LTAP01374 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC11.79□□□□□ -0.52
LTAP01374 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LTAP01374 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
LTAP01374 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
LTAP01374 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC11.79□□□□□ -0.52
LTAP01374 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
LTAP01374 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LTAP01374 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
LTAP01374 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LTAP01374 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC11.78□□□□□ -0.52
LTAP01374 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC11.78□□□□□ -0.52
LTAP01374 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LTAP01374 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
LTAP01374 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC11.78□□□□□ -0.52
LTAP01374 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LTAP01374 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC11.78□□□□□ -0.52
LTAP01374 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC11.78□□□□□ -0.52
LTAP01374 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC11.78□□□□□ -0.52
LTAP01374 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LTAP01374 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC11.78□□□□□ -0.52
LTAP01374 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LTAP01374 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
LTAP01374 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC11.78□□□□□ -0.52
LTAP01374 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC11.78□□□□□ -0.52
LTAP01374 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
LTAP01374 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LTAP01374 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LTAP01374 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC11.78□□□□□ -0.52
LTAP01374 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LTAP01374 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
LTAP01374 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
LTAP01374 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
LTAP01374 GHSR-202ENST00000427970 912 ntBASIC11.78□□□□□ -0.52
LTAP01374 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC11.78□□□□□ -0.52
LTAP01374 AC018712.1-201ENST00000455767 687 ntBASIC11.78□□□□□ -0.52
LTAP01374 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC11.78□□□□□ -0.52
LTAP01374 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC11.78□□□□□ -0.52
LTAP01374 HNRNPUP1-201ENST00000554987 333 ntBASIC11.78□□□□□ -0.52
LTAP01374 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
LTAP01374 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC11.78□□□□□ -0.52
LTAP01374 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC11.78□□□□□ -0.52
LTAP01374 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC11.78□□□□□ -0.52
LTAP01374 AC023141.13-201ENST00000604991 943 ntBASIC11.78□□□□□ -0.52
LTAP01374 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms