Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.47■□□□□ 0.07
PDGFBP01127 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.47■□□□□ 0.07
PDGFBP01127 AL158070.2-201ENST00000623713 1621 ntBASIC15.47■□□□□ 0.07
PDGFBP01127 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PDGFBP01127 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PDGFBP01127 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.47■□□□□ 0.07
PDGFBP01127 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PDGFBP01127 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
PDGFBP01127 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
PDGFBP01127 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
PDGFBP01127 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
PDGFBP01127 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PDGFBP01127 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PDGFBP01127 RN7SKP214-201ENST00000364208 315 ntBASIC15.47■□□□□ 0.07
PDGFBP01127 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.47■□□□□ 0.07
PDGFBP01127 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC15.47■□□□□ 0.07
PDGFBP01127 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC15.47■□□□□ 0.07
PDGFBP01127 KRT8P14-201ENST00000414254 1442 ntBASIC15.47■□□□□ 0.07
PDGFBP01127 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC15.47■□□□□ 0.07
PDGFBP01127 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC15.47■□□□□ 0.07
PDGFBP01127 PUDPP3-201ENST00000445368 636 ntBASIC15.47■□□□□ 0.07
PDGFBP01127 PIN4P1-201ENST00000451079 396 ntBASIC15.47■□□□□ 0.07
PDGFBP01127 RPL18P13-201ENST00000478088 569 ntBASIC15.47■□□□□ 0.07
PDGFBP01127 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.47■□□□□ 0.07
PDGFBP01127 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.47■□□□□ 0.07
PDGFBP01127 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC15.47■□□□□ 0.07
PDGFBP01127 MIR4683-201ENST00000579659 81 ntBASIC15.47■□□□□ 0.07
PDGFBP01127 AC005324.6-201ENST00000587972 613 ntBASIC15.47■□□□□ 0.07
PDGFBP01127 AC007787.1-201ENST00000588095 1583 ntBASIC15.47■□□□□ 0.07
PDGFBP01127 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.47■□□□□ 0.07
PDGFBP01127 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC15.47■□□□□ 0.07
PDGFBP01127 AL136301.1-201ENST00000615830 422 ntBASIC15.47■□□□□ 0.07
PDGFBP01127 AC242376.2-201ENST00000619355 883 ntBASIC15.47■□□□□ 0.07
PDGFBP01127 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.47■□□□□ 0.07
PDGFBP01127 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC15.47■□□□□ 0.07
PDGFBP01127 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
PDGFBP01127 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
PDGFBP01127 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.47■□□□□ 0.07
PDGFBP01127 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC15.47■□□□□ 0.07
PDGFBP01127 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PDGFBP01127 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
PDGFBP01127 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC15.47■□□□□ 0.07
PDGFBP01127 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PDGFBP01127 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PDGFBP01127 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
PDGFBP01127 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
PDGFBP01127 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PDGFBP01127 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
PDGFBP01127 AC074138.1-201ENST00000611182 1303 ntBASIC15.46■□□□□ 0.07
PDGFBP01127 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
PDGFBP01127 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PDGFBP01127 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PDGFBP01127 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PDGFBP01127 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.46■□□□□ 0.07
PDGFBP01127 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
PDGFBP01127 AC079112.1-201ENST00000454972 939 ntBASIC15.46■□□□□ 0.07
PDGFBP01127 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC15.46■□□□□ 0.07
PDGFBP01127 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC15.46■□□□□ 0.07
PDGFBP01127 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC15.46■□□□□ 0.07
PDGFBP01127 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC15.46■□□□□ 0.07
PDGFBP01127 NAT9-211ENST00000580632 799 ntTSL 3 BASIC15.46■□□□□ 0.07
PDGFBP01127 AC103810.10-201ENST00000606504 343 ntBASIC15.46■□□□□ 0.07
PDGFBP01127 AC051619.9-201ENST00000623237 597 ntBASIC15.46■□□□□ 0.07
PDGFBP01127 AC148477.9-201ENST00000623974 539 ntBASIC15.46■□□□□ 0.07
PDGFBP01127 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PDGFBP01127 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PDGFBP01127 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PDGFBP01127 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PDGFBP01127 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PDGFBP01127 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
PDGFBP01127 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PDGFBP01127 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.46■□□□□ 0.07
PDGFBP01127 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PDGFBP01127 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
PDGFBP01127 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC15.46■□□□□ 0.06
PDGFBP01127 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC15.46■□□□□ 0.06
PDGFBP01127 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
PDGFBP01127 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.46■□□□□ 0.06
PDGFBP01127 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
PDGFBP01127 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
PDGFBP01127 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.06
PDGFBP01127 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
PDGFBP01127 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.45■□□□□ 0.06
PDGFBP01127 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC15.45■□□□□ 0.06
PDGFBP01127 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
PDGFBP01127 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PDGFBP01127 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
PDGFBP01127 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC15.45■□□□□ 0.06
PDGFBP01127 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDGFBP01127 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
PDGFBP01127 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDGFBP01127 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDGFBP01127 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
PDGFBP01127 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDGFBP01127 AC020916.1-201ENST00000587762 1774 ntBASIC15.45■□□□□ 0.06
PDGFBP01127 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.45■□□□□ 0.06
PDGFBP01127 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PDGFBP01127 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
PDGFBP01127 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC15.45■□□□□ 0.06
PDGFBP01127 OR2K2-202ENST00000374428 1038 ntBASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms