Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
RAPGEF3O95398 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
RAPGEF3O95398 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
RAPGEF3O95398 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC22.84■■□□□ 1.25
RAPGEF3O95398 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
RAPGEF3O95398 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
RAPGEF3O95398 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
RAPGEF3O95398 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
RAPGEF3O95398 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
RAPGEF3O95398 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
RAPGEF3O95398 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC22.83■■□□□ 1.25
RAPGEF3O95398 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
RAPGEF3O95398 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
RAPGEF3O95398 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC22.83■■□□□ 1.25
RAPGEF3O95398 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
RAPGEF3O95398 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
RAPGEF3O95398 FAM58BP-201ENST00000439056 645 ntBASIC22.83■■□□□ 1.25
RAPGEF3O95398 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC22.83■■□□□ 1.25
RAPGEF3O95398 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC22.83■■□□□ 1.25
RAPGEF3O95398 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC22.83■■□□□ 1.25
RAPGEF3O95398 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC22.83■■□□□ 1.25
RAPGEF3O95398 AC008723.1-201ENST00000506922 207 ntBASIC22.83■■□□□ 1.25
RAPGEF3O95398 TPM1-223ENST00000560445 485 ntTSL 3 BASIC22.83■■□□□ 1.25
RAPGEF3O95398 AP003392.6-201ENST00000607709 325 ntBASIC22.83■■□□□ 1.25
RAPGEF3O95398 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC22.83■■□□□ 1.25
RAPGEF3O95398 AC105137.3-201ENST00000617588 984 ntBASIC22.83■■□□□ 1.25
RAPGEF3O95398 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
RAPGEF3O95398 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
RAPGEF3O95398 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC22.83■■□□□ 1.24
RAPGEF3O95398 REXO1L5P-201ENST00000622260 2098 ntBASIC22.83■■□□□ 1.24
RAPGEF3O95398 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC22.83■■□□□ 1.24
RAPGEF3O95398 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
RAPGEF3O95398 AL008718.2-201ENST00000609206 1313 ntBASIC22.82■■□□□ 1.24
RAPGEF3O95398 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
RAPGEF3O95398 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC22.82■■□□□ 1.24
RAPGEF3O95398 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
RAPGEF3O95398 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
RAPGEF3O95398 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
RAPGEF3O95398 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
RAPGEF3O95398 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC22.82■■□□□ 1.24
RAPGEF3O95398 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
RAPGEF3O95398 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
RAPGEF3O95398 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
RAPGEF3O95398 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
RAPGEF3O95398 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC22.82■■□□□ 1.24
RAPGEF3O95398 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC22.82■■□□□ 1.24
RAPGEF3O95398 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC22.82■■□□□ 1.24
RAPGEF3O95398 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC22.82■■□□□ 1.24
RAPGEF3O95398 TMCO5B-205ENST00000530020 894 ntBASIC22.82■■□□□ 1.24
RAPGEF3O95398 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
RAPGEF3O95398 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC22.82■■□□□ 1.24
RAPGEF3O95398 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC22.82■■□□□ 1.24
RAPGEF3O95398 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
RAPGEF3O95398 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC22.82■■□□□ 1.24
RAPGEF3O95398 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
RAPGEF3O95398 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
RAPGEF3O95398 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
RAPGEF3O95398 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
RAPGEF3O95398 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
RAPGEF3O95398 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
RAPGEF3O95398 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
RAPGEF3O95398 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
RAPGEF3O95398 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
RAPGEF3O95398 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC22.81■■□□□ 1.24
RAPGEF3O95398 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
RAPGEF3O95398 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
RAPGEF3O95398 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC22.81■■□□□ 1.24
RAPGEF3O95398 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC22.81■■□□□ 1.24
RAPGEF3O95398 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC22.81■■□□□ 1.24
RAPGEF3O95398 ALG1L6P-201ENST00000515248 758 ntBASIC22.81■■□□□ 1.24
RAPGEF3O95398 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
RAPGEF3O95398 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC22.81■■□□□ 1.24
RAPGEF3O95398 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC22.81■■□□□ 1.24
RAPGEF3O95398 FO393412.1-201ENST00000619841 382 ntBASIC22.81■■□□□ 1.24
RAPGEF3O95398 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC22.81■■□□□ 1.24
RAPGEF3O95398 Z98259.2-201ENST00000641583 609 ntBASIC22.81■■□□□ 1.24
RAPGEF3O95398 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
RAPGEF3O95398 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC22.81■■□□□ 1.24
RAPGEF3O95398 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC22.81■■□□□ 1.24
RAPGEF3O95398 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
RAPGEF3O95398 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
RAPGEF3O95398 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC22.81■■□□□ 1.24
RAPGEF3O95398 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
RAPGEF3O95398 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
RAPGEF3O95398 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
RAPGEF3O95398 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
RAPGEF3O95398 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
RAPGEF3O95398 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
RAPGEF3O95398 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC22.8■■□□□ 1.24
RAPGEF3O95398 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC22.8■■□□□ 1.24
RAPGEF3O95398 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
RAPGEF3O95398 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
RAPGEF3O95398 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC22.8■■□□□ 1.24
RAPGEF3O95398 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC22.8■■□□□ 1.24
RAPGEF3O95398 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
RAPGEF3O95398 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
RAPGEF3O95398 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC22.8■■□□□ 1.24
RAPGEF3O95398 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
RAPGEF3O95398 AC020910.5-201ENST00000623668 1865 ntBASIC22.8■■□□□ 1.24
RAPGEF3O95398 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms