Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.73■□□□□ 0.11
VAPBO95292 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.73■□□□□ 0.11
VAPBO95292 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
VAPBO95292 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VAPBO95292 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.73■□□□□ 0.11
VAPBO95292 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VAPBO95292 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
VAPBO95292 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
VAPBO95292 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
VAPBO95292 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
VAPBO95292 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VAPBO95292 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.73■□□□□ 0.11
VAPBO95292 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.73■□□□□ 0.11
VAPBO95292 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.73■□□□□ 0.11
VAPBO95292 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.73■□□□□ 0.11
VAPBO95292 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
VAPBO95292 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.73■□□□□ 0.11
VAPBO95292 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
VAPBO95292 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.73■□□□□ 0.11
VAPBO95292 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.73■□□□□ 0.11
VAPBO95292 AL033527.5-202ENST00000641632 1098 ntBASIC15.73■□□□□ 0.11
VAPBO95292 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.73■□□□□ 0.11
VAPBO95292 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
VAPBO95292 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
VAPBO95292 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
VAPBO95292 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VAPBO95292 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.73■□□□□ 0.11
VAPBO95292 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
VAPBO95292 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VAPBO95292 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
VAPBO95292 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VAPBO95292 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.72■□□□□ 0.11
VAPBO95292 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
VAPBO95292 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.72■□□□□ 0.11
VAPBO95292 AC148477.4-201ENST00000613430 1793 ntBASIC15.72■□□□□ 0.11
VAPBO95292 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.72■□□□□ 0.11
VAPBO95292 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VAPBO95292 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
VAPBO95292 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
VAPBO95292 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
VAPBO95292 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.72■□□□□ 0.11
VAPBO95292 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VAPBO95292 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
VAPBO95292 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
VAPBO95292 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
VAPBO95292 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
VAPBO95292 AL161772.1-201ENST00000610494 4412 ntBASIC15.72■□□□□ 0.11
VAPBO95292 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
VAPBO95292 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
VAPBO95292 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VAPBO95292 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VAPBO95292 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
VAPBO95292 SERBP1P3-201ENST00000459980 809 ntBASIC15.72■□□□□ 0.11
VAPBO95292 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15.72■□□□□ 0.11
VAPBO95292 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
VAPBO95292 AC004449.1-201ENST00000564240 433 ntBASIC15.72■□□□□ 0.11
VAPBO95292 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.72■□□□□ 0.11
VAPBO95292 AC023024.2-201ENST00000623561 1993 ntBASIC15.72■□□□□ 0.11
VAPBO95292 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
VAPBO95292 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
VAPBO95292 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.72■□□□□ 0.11
VAPBO95292 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
VAPBO95292 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
VAPBO95292 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
VAPBO95292 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.72■□□□□ 0.11
VAPBO95292 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VAPBO95292 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VAPBO95292 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
VAPBO95292 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.72■□□□□ 0.11
VAPBO95292 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VAPBO95292 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VAPBO95292 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.71■□□□□ 0.11
VAPBO95292 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VAPBO95292 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.71■□□□□ 0.11
VAPBO95292 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.71■□□□□ 0.11
VAPBO95292 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.71■□□□□ 0.11
VAPBO95292 TUBB3P1-201ENST00000405796 1332 ntBASIC15.71■□□□□ 0.11
VAPBO95292 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
VAPBO95292 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.71■□□□□ 0.11
VAPBO95292 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VAPBO95292 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VAPBO95292 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
VAPBO95292 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VAPBO95292 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.71■□□□□ 0.11
VAPBO95292 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.71■□□□□ 0.11
VAPBO95292 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VAPBO95292 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
VAPBO95292 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
VAPBO95292 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
VAPBO95292 AC074338.1-201ENST00000416825 156 ntBASIC15.71■□□□□ 0.11
VAPBO95292 CNN2P2-201ENST00000443536 909 ntBASIC15.71■□□□□ 0.11
VAPBO95292 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.71■□□□□ 0.11
VAPBO95292 CNN2P3-201ENST00000450201 906 ntBASIC15.71■□□□□ 0.11
VAPBO95292 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.71■□□□□ 0.11
VAPBO95292 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.71■□□□□ 0.11
VAPBO95292 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.71■□□□□ 0.11
VAPBO95292 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.71■□□□□ 0.11
VAPBO95292 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.71■□□□□ 0.11
VAPBO95292 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.71■□□□□ 0.11
VAPBO95292 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms