Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTNND1O60716 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
CTNND1O60716 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC18.13■□□□□ 0.49
CTNND1O60716 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CTNND1O60716 MPV17-205ENST00000402310 906 ntTSL 5 BASIC18.13■□□□□ 0.49
CTNND1O60716 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTNND1O60716 AC007969.1-201ENST00000433675 447 ntBASIC18.13■□□□□ 0.49
CTNND1O60716 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC18.13■□□□□ 0.49
CTNND1O60716 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC18.13■□□□□ 0.49
CTNND1O60716 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC18.13■□□□□ 0.49
CTNND1O60716 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
CTNND1O60716 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC18.13■□□□□ 0.49
CTNND1O60716 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTNND1O60716 AL008638.5-201ENST00000623814 1298 ntBASIC18.13■□□□□ 0.49
CTNND1O60716 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC18.13■□□□□ 0.49
CTNND1O60716 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTNND1O60716 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTNND1O60716 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CTNND1O60716 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTNND1O60716 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CTNND1O60716 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CTNND1O60716 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTNND1O60716 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CTNND1O60716 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CTNND1O60716 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTNND1O60716 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTNND1O60716 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTNND1O60716 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTNND1O60716 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTNND1O60716 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTNND1O60716 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC18.13■□□□□ 0.49
CTNND1O60716 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC18.12■□□□□ 0.49
CTNND1O60716 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTNND1O60716 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
CTNND1O60716 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CTNND1O60716 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTNND1O60716 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC18.12■□□□□ 0.49
CTNND1O60716 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CTNND1O60716 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CTNND1O60716 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CTNND1O60716 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTNND1O60716 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTNND1O60716 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTNND1O60716 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC18.12■□□□□ 0.49
CTNND1O60716 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CTNND1O60716 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC18.12■□□□□ 0.49
CTNND1O60716 OARD1-212ENST00000482515 832 ntTSL 2 BASIC18.12■□□□□ 0.49
CTNND1O60716 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CTNND1O60716 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC18.12■□□□□ 0.49
CTNND1O60716 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC18.12■□□□□ 0.49
CTNND1O60716 EEF1DP1-201ENST00000585891 896 ntBASIC18.12■□□□□ 0.49
CTNND1O60716 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC18.12■□□□□ 0.49
CTNND1O60716 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC18.12■□□□□ 0.49
CTNND1O60716 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
CTNND1O60716 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CTNND1O60716 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CTNND1O60716 AC015818.8-201ENST00000587907 1519 ntBASIC18.12■□□□□ 0.49
CTNND1O60716 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTNND1O60716 AC092364.2-201ENST00000596710 2692 ntBASIC18.12■□□□□ 0.49
CTNND1O60716 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CTNND1O60716 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTNND1O60716 AC148477.4-201ENST00000613430 1793 ntBASIC18.12■□□□□ 0.49
CTNND1O60716 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC18.12■□□□□ 0.49
CTNND1O60716 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTNND1O60716 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC18.11■□□□□ 0.49
CTNND1O60716 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTNND1O60716 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CTNND1O60716 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTNND1O60716 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CTNND1O60716 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC18.11■□□□□ 0.49
CTNND1O60716 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTNND1O60716 TPM3P8-201ENST00000330554 643 ntBASIC18.11■□□□□ 0.49
CTNND1O60716 B9D1-203ENST00000395615 805 ntTSL 3 BASIC18.11■□□□□ 0.49
CTNND1O60716 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC18.11■□□□□ 0.49
CTNND1O60716 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC18.11■□□□□ 0.49
CTNND1O60716 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC18.11■□□□□ 0.49
CTNND1O60716 RPSAP36-202ENST00000494591 1261 ntBASIC18.11■□□□□ 0.49
CTNND1O60716 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC18.11■□□□□ 0.49
CTNND1O60716 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTNND1O60716 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTNND1O60716 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC18.11■□□□□ 0.49
CTNND1O60716 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC18.11■□□□□ 0.49
CTNND1O60716 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC18.11■□□□□ 0.49
CTNND1O60716 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CTNND1O60716 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTNND1O60716 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC18.11■□□□□ 0.49
CTNND1O60716 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTNND1O60716 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CTNND1O60716 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTNND1O60716 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC18.11■□□□□ 0.49
CTNND1O60716 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.11■□□□□ 0.49
CTNND1O60716 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CTNND1O60716 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC18.11■□□□□ 0.49
CTNND1O60716 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTNND1O60716 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTNND1O60716 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTNND1O60716 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC18.11■□□□□ 0.49
CTNND1O60716 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTNND1O60716 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
CTNND1O60716 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms