Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 IGHV3-72-202ENST00000621503 303 ntBASIC16.19■□□□□ 0.18
MSI1O43347 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.19■□□□□ 0.18
MSI1O43347 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
MSI1O43347 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MSI1O43347 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MSI1O43347 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
MSI1O43347 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
MSI1O43347 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MSI1O43347 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MSI1O43347 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.19■□□□□ 0.18
MSI1O43347 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MSI1O43347 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MSI1O43347 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
MSI1O43347 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.19■□□□□ 0.18
MSI1O43347 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.19■□□□□ 0.18
MSI1O43347 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.19■□□□□ 0.18
MSI1O43347 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MSI1O43347 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MSI1O43347 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MSI1O43347 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MSI1O43347 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MSI1O43347 CU639417.3-201ENST00000624240 1404 ntBASIC16.19■□□□□ 0.18
MSI1O43347 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MSI1O43347 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
MSI1O43347 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.18■□□□□ 0.18
MSI1O43347 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.18■□□□□ 0.18
MSI1O43347 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.18■□□□□ 0.18
MSI1O43347 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MSI1O43347 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MSI1O43347 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MSI1O43347 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
MSI1O43347 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.18■□□□□ 0.18
MSI1O43347 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MSI1O43347 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.18■□□□□ 0.18
MSI1O43347 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
MSI1O43347 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MSI1O43347 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.18■□□□□ 0.18
MSI1O43347 AC084364.1-201ENST00000551967 1556 ntBASIC16.18■□□□□ 0.18
MSI1O43347 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.18■□□□□ 0.18
MSI1O43347 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
MSI1O43347 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.18■□□□□ 0.18
MSI1O43347 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
MSI1O43347 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MSI1O43347 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.18■□□□□ 0.18
MSI1O43347 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.18■□□□□ 0.18
MSI1O43347 RN7SL837P-201ENST00000463010 287 ntBASIC16.18■□□□□ 0.18
MSI1O43347 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
MSI1O43347 AC124283.3-201ENST00000570869 594 ntBASIC16.18■□□□□ 0.18
MSI1O43347 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MSI1O43347 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MSI1O43347 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
MSI1O43347 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.18■□□□□ 0.18
MSI1O43347 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
MSI1O43347 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MSI1O43347 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
MSI1O43347 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MSI1O43347 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
MSI1O43347 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.18■□□□□ 0.18
MSI1O43347 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
MSI1O43347 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
MSI1O43347 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
MSI1O43347 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MSI1O43347 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.18■□□□□ 0.18
MSI1O43347 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MSI1O43347 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MSI1O43347 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
MSI1O43347 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
MSI1O43347 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
MSI1O43347 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MSI1O43347 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
MSI1O43347 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
MSI1O43347 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
MSI1O43347 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MSI1O43347 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.17■□□□□ 0.18
MSI1O43347 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MSI1O43347 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MSI1O43347 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.17■□□□□ 0.18
MSI1O43347 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MSI1O43347 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MSI1O43347 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MSI1O43347 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.17■□□□□ 0.18
MSI1O43347 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.17■□□□□ 0.18
MSI1O43347 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.17■□□□□ 0.18
MSI1O43347 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.17■□□□□ 0.18
MSI1O43347 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MSI1O43347 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MSI1O43347 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MSI1O43347 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
MSI1O43347 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.17■□□□□ 0.18
MSI1O43347 AC134915.1-201ENST00000426461 574 ntBASIC16.17■□□□□ 0.18
MSI1O43347 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MSI1O43347 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MSI1O43347 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
MSI1O43347 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.17■□□□□ 0.18
MSI1O43347 AC120045.2-201ENST00000567334 178 ntBASIC16.17■□□□□ 0.18
MSI1O43347 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC16.17■□□□□ 0.18
MSI1O43347 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
MSI1O43347 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
MSI1O43347 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.17■□□□□ 0.18
MSI1O43347 AC025181.2-201ENST00000606994 802 ntBASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms