Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 FAM86B3P-203ENST00000523992 854 ntBASIC24.38■■□□□ 1.49
CHD1O14646 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC24.38■■□□□ 1.49
CHD1O14646 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC24.38■■□□□ 1.49
CHD1O14646 AC009884.2-201ENST00000603110 324 ntBASIC24.38■■□□□ 1.49
CHD1O14646 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC24.38■■□□□ 1.49
CHD1O14646 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC24.38■■□□□ 1.49
CHD1O14646 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CHD1O14646 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CHD1O14646 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CHD1O14646 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC24.38■■□□□ 1.49
CHD1O14646 AL157414.3-201ENST00000624276 1954 ntBASIC24.38■■□□□ 1.49
CHD1O14646 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
CHD1O14646 AC068880.1-201ENST00000507289 2297 ntBASIC24.38■■□□□ 1.49
CHD1O14646 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CHD1O14646 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CHD1O14646 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CHD1O14646 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
CHD1O14646 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
CHD1O14646 ABHD17AP9-201ENST00000561925 548 ntBASIC24.38■■□□□ 1.49
CHD1O14646 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CHD1O14646 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
CHD1O14646 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC24.38■■□□□ 1.49
CHD1O14646 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CHD1O14646 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
CHD1O14646 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC24.37■■□□□ 1.49
CHD1O14646 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC24.37■■□□□ 1.49
CHD1O14646 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CHD1O14646 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CHD1O14646 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CHD1O14646 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
CHD1O14646 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
CHD1O14646 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CHD1O14646 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC24.37■■□□□ 1.49
CHD1O14646 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC24.37■■□□□ 1.49
CHD1O14646 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CHD1O14646 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC24.37■■□□□ 1.49
CHD1O14646 OR2R1P-201ENST00000441404 914 ntBASIC24.37■■□□□ 1.49
CHD1O14646 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC24.37■■□□□ 1.49
CHD1O14646 AC114947.1-202ENST00000514136 344 ntBASIC24.37■■□□□ 1.49
CHD1O14646 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC24.37■■□□□ 1.49
CHD1O14646 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CHD1O14646 MST1L-201ENST00000442552 2185 ntBASIC24.37■■□□□ 1.49
CHD1O14646 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC24.37■■□□□ 1.49
CHD1O14646 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
CHD1O14646 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CHD1O14646 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
CHD1O14646 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CHD1O14646 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC24.37■■□□□ 1.49
CHD1O14646 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CHD1O14646 REXO1L5P-201ENST00000622260 2098 ntBASIC24.37■■□□□ 1.49
CHD1O14646 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC24.37■■□□□ 1.49
CHD1O14646 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC24.36■■□□□ 1.49
CHD1O14646 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CHD1O14646 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC24.36■■□□□ 1.49
CHD1O14646 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
CHD1O14646 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
CHD1O14646 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
CHD1O14646 HLA-DMA-203ENST00000395305 777 ntBASIC24.36■■□□□ 1.49
CHD1O14646 RN7SKP109-201ENST00000410592 316 ntBASIC24.36■■□□□ 1.49
CHD1O14646 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC24.36■■□□□ 1.49
CHD1O14646 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CHD1O14646 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC24.36■■□□□ 1.49
CHD1O14646 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CHD1O14646 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CHD1O14646 AC018695.7-201ENST00000624587 2492 ntBASIC24.36■■□□□ 1.49
CHD1O14646 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
CHD1O14646 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
CHD1O14646 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC24.36■■□□□ 1.49
CHD1O14646 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CHD1O14646 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CHD1O14646 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC24.36■■□□□ 1.49
CHD1O14646 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CHD1O14646 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
CHD1O14646 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC24.35■■□□□ 1.49
CHD1O14646 XBP1P1-201ENST00000436573 652 ntBASIC24.35■■□□□ 1.49
CHD1O14646 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC24.35■■□□□ 1.49
CHD1O14646 RNA5SP417-201ENST00000516459 108 ntBASIC24.35■■□□□ 1.49
CHD1O14646 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC24.35■■□□□ 1.49
CHD1O14646 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC24.35■■□□□ 1.49
CHD1O14646 AC233280.19-201ENST00000633223 136 ntBASIC24.35■■□□□ 1.49
CHD1O14646 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC24.35■■□□□ 1.49
CHD1O14646 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC24.35■■□□□ 1.49
CHD1O14646 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CHD1O14646 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC24.35■■□□□ 1.49
CHD1O14646 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
CHD1O14646 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC24.35■■□□□ 1.49
CHD1O14646 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CHD1O14646 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
CHD1O14646 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CHD1O14646 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC24.35■■□□□ 1.49
CHD1O14646 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC24.35■■□□□ 1.49
CHD1O14646 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
CHD1O14646 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CHD1O14646 HLA-DQB1-202ENST00000399079 1501 ntBASIC24.35■■□□□ 1.49
CHD1O14646 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
CHD1O14646 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC24.35■■□□□ 1.49
CHD1O14646 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC24.35■■□□□ 1.49
CHD1O14646 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC24.35■■□□□ 1.49
CHD1O14646 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC24.35■■□□□ 1.49
CHD1O14646 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms