Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
TRAV5A0A0B4J249 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
TRAV5A0A0B4J249 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
TRAV5A0A0B4J249 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
TRAV5A0A0B4J249 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
TRAV5A0A0B4J249 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TRAV5A0A0B4J249 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
TRAV5A0A0B4J249 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAV5A0A0B4J249 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TRAV5A0A0B4J249 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC12.2□□□□□ -0.46
TRAV5A0A0B4J249 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
TRAV5A0A0B4J249 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAV5A0A0B4J249 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC12.2□□□□□ -0.46
TRAV5A0A0B4J249 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TRAV5A0A0B4J249 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
TRAV5A0A0B4J249 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAV5A0A0B4J249 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAV5A0A0B4J249 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAV5A0A0B4J249 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC12.2□□□□□ -0.46
TRAV5A0A0B4J249 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TRAV5A0A0B4J249 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
TRAV5A0A0B4J249 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TRAV5A0A0B4J249 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAV5A0A0B4J249 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAV5A0A0B4J249 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC12.2□□□□□ -0.46
TRAV5A0A0B4J249 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAV5A0A0B4J249 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAV5A0A0B4J249 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAV5A0A0B4J249 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
TRAV5A0A0B4J249 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAV5A0A0B4J249 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAV5A0A0B4J249 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC12.2□□□□□ -0.46
TRAV5A0A0B4J249 CRCP-205ENST00000431089 942 ntTSL 2 BASIC12.2□□□□□ -0.46
TRAV5A0A0B4J249 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
TRAV5A0A0B4J249 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC12.2□□□□□ -0.46
TRAV5A0A0B4J249 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC12.2□□□□□ -0.46
TRAV5A0A0B4J249 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC12.2□□□□□ -0.46
TRAV5A0A0B4J249 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC12.2□□□□□ -0.46
TRAV5A0A0B4J249 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TRAV5A0A0B4J249 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC12.2□□□□□ -0.46
TRAV5A0A0B4J249 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAV5A0A0B4J249 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAV5A0A0B4J249 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAV5A0A0B4J249 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAV5A0A0B4J249 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAV5A0A0B4J249 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAV5A0A0B4J249 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAV5A0A0B4J249 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAV5A0A0B4J249 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC12.2□□□□□ -0.46
TRAV5A0A0B4J249 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAV5A0A0B4J249 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC12.2□□□□□ -0.46
TRAV5A0A0B4J249 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TRAV5A0A0B4J249 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC12.2□□□□□ -0.46
TRAV5A0A0B4J249 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAV5A0A0B4J249 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TRAV5A0A0B4J249 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAV5A0A0B4J249 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAV5A0A0B4J249 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAV5A0A0B4J249 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TRAV5A0A0B4J249 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC12.2□□□□□ -0.46
TRAV5A0A0B4J249 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
TRAV5A0A0B4J249 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAV5A0A0B4J249 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRAV5A0A0B4J249 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC12.19□□□□□ -0.46
TRAV5A0A0B4J249 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRAV5A0A0B4J249 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TRAV5A0A0B4J249 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRAV5A0A0B4J249 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TRAV5A0A0B4J249 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRAV5A0A0B4J249 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC12.19□□□□□ -0.46
TRAV5A0A0B4J249 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC12.19□□□□□ -0.46
TRAV5A0A0B4J249 BSG-215ENST00000618006 1329 ntTSL 2 BASIC12.19□□□□□ -0.46
TRAV5A0A0B4J249 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
TRAV5A0A0B4J249 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRAV5A0A0B4J249 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRAV5A0A0B4J249 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRAV5A0A0B4J249 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRAV5A0A0B4J249 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRAV5A0A0B4J249 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRAV5A0A0B4J249 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TRAV5A0A0B4J249 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
TRAV5A0A0B4J249 PHKG1P2-201ENST00000457537 863 ntBASIC12.19□□□□□ -0.46
TRAV5A0A0B4J249 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC12.19□□□□□ -0.46
TRAV5A0A0B4J249 IGHV3-22-201ENST00000520721 359 ntBASIC12.19□□□□□ -0.46
TRAV5A0A0B4J249 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC12.19□□□□□ -0.46
TRAV5A0A0B4J249 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC12.19□□□□□ -0.46
TRAV5A0A0B4J249 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC12.19□□□□□ -0.46
TRAV5A0A0B4J249 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC12.19□□□□□ -0.46
TRAV5A0A0B4J249 LITAF-211ENST00000572255 516 ntTSL 4 BASIC12.19□□□□□ -0.46
TRAV5A0A0B4J249 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
TRAV5A0A0B4J249 AL031008.1-201ENST00000619963 541 ntBASIC12.19□□□□□ -0.46
TRAV5A0A0B4J249 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC12.19□□□□□ -0.46
TRAV5A0A0B4J249 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC12.19□□□□□ -0.46
TRAV5A0A0B4J249 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRAV5A0A0B4J249 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
TRAV5A0A0B4J249 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRAV5A0A0B4J249 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRAV5A0A0B4J249 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRAV5A0A0B4J249 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
TRAV5A0A0B4J249 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms