Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RAI2Q9Y5P3 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAI2Q9Y5P3 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAI2Q9Y5P3 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAI2Q9Y5P3 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAI2Q9Y5P3 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.8■□□□□ 0.12
RAI2Q9Y5P3 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.8■□□□□ 0.12
RAI2Q9Y5P3 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAI2Q9Y5P3 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAI2Q9Y5P3 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.8■□□□□ 0.12
RAI2Q9Y5P3 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.8■□□□□ 0.12
RAI2Q9Y5P3 AC007541.1-201ENST00000570282 1469 ntBASIC15.8■□□□□ 0.12
RAI2Q9Y5P3 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAI2Q9Y5P3 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
RAI2Q9Y5P3 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAI2Q9Y5P3 AL133267.1-201ENST00000398220 340 ntBASIC15.8■□□□□ 0.12
RAI2Q9Y5P3 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.8■□□□□ 0.12
RAI2Q9Y5P3 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.8■□□□□ 0.12
RAI2Q9Y5P3 INE1-201ENST00000456273 945 ntBASIC15.8■□□□□ 0.12
RAI2Q9Y5P3 ACA64.2-201ENST00000459014 129 ntBASIC15.8■□□□□ 0.12
RAI2Q9Y5P3 KRT18P43-201ENST00000469825 1281 ntBASIC15.8■□□□□ 0.12
RAI2Q9Y5P3 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC15.8■□□□□ 0.12
RAI2Q9Y5P3 AC093004.1-201ENST00000508850 424 ntBASIC15.8■□□□□ 0.12
RAI2Q9Y5P3 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
RAI2Q9Y5P3 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RAI2Q9Y5P3 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.8■□□□□ 0.12
RAI2Q9Y5P3 RARRES2P5-201ENST00000564013 466 ntBASIC15.8■□□□□ 0.12
RAI2Q9Y5P3 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.8■□□□□ 0.12
RAI2Q9Y5P3 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.8■□□□□ 0.12
RAI2Q9Y5P3 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.8■□□□□ 0.12
RAI2Q9Y5P3 AC015910.1-201ENST00000579400 975 ntBASIC15.8■□□□□ 0.12
RAI2Q9Y5P3 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RAI2Q9Y5P3 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.8■□□□□ 0.12
RAI2Q9Y5P3 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAI2Q9Y5P3 AL391069.4-201ENST00000609583 481 ntBASIC15.8■□□□□ 0.12
RAI2Q9Y5P3 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.8■□□□□ 0.12
RAI2Q9Y5P3 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.8■□□□□ 0.12
RAI2Q9Y5P3 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.8■□□□□ 0.12
RAI2Q9Y5P3 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAI2Q9Y5P3 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAI2Q9Y5P3 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAI2Q9Y5P3 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAI2Q9Y5P3 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RAI2Q9Y5P3 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RAI2Q9Y5P3 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.8■□□□□ 0.12
RAI2Q9Y5P3 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAI2Q9Y5P3 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.8■□□□□ 0.12
RAI2Q9Y5P3 AC087481.3-201ENST00000602886 1894 ntBASIC15.8■□□□□ 0.12
RAI2Q9Y5P3 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RAI2Q9Y5P3 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RAI2Q9Y5P3 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RAI2Q9Y5P3 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.8■□□□□ 0.12
RAI2Q9Y5P3 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.8■□□□□ 0.12
RAI2Q9Y5P3 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RAI2Q9Y5P3 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAI2Q9Y5P3 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAI2Q9Y5P3 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAI2Q9Y5P3 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RAI2Q9Y5P3 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAI2Q9Y5P3 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAI2Q9Y5P3 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAI2Q9Y5P3 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAI2Q9Y5P3 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAI2Q9Y5P3 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.79■□□□□ 0.12
RAI2Q9Y5P3 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAI2Q9Y5P3 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RAI2Q9Y5P3 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.79■□□□□ 0.12
RAI2Q9Y5P3 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.79■□□□□ 0.12
RAI2Q9Y5P3 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAI2Q9Y5P3 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
RAI2Q9Y5P3 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
RAI2Q9Y5P3 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.79■□□□□ 0.12
RAI2Q9Y5P3 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.79■□□□□ 0.12
RAI2Q9Y5P3 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.79■□□□□ 0.12
RAI2Q9Y5P3 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RAI2Q9Y5P3 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RAI2Q9Y5P3 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
RAI2Q9Y5P3 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
RAI2Q9Y5P3 MIR658-201ENST00000385210 100 ntBASIC15.79■□□□□ 0.12
RAI2Q9Y5P3 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAI2Q9Y5P3 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.79■□□□□ 0.12
RAI2Q9Y5P3 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
RAI2Q9Y5P3 AC004945.1-201ENST00000416738 983 ntBASIC15.79■□□□□ 0.12
RAI2Q9Y5P3 MEP1AP4-201ENST00000423244 1087 ntBASIC15.79■□□□□ 0.12
RAI2Q9Y5P3 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.79■□□□□ 0.12
RAI2Q9Y5P3 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RAI2Q9Y5P3 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.79■□□□□ 0.12
RAI2Q9Y5P3 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.79■□□□□ 0.12
RAI2Q9Y5P3 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.79■□□□□ 0.12
RAI2Q9Y5P3 API5-211ENST00000534695 560 ntTSL 5 BASIC15.79■□□□□ 0.12
RAI2Q9Y5P3 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.79■□□□□ 0.12
RAI2Q9Y5P3 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC15.79■□□□□ 0.12
RAI2Q9Y5P3 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.79■□□□□ 0.12
RAI2Q9Y5P3 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.79■□□□□ 0.12
RAI2Q9Y5P3 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
RAI2Q9Y5P3 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
RAI2Q9Y5P3 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
RAI2Q9Y5P3 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.79■□□□□ 0.12
RAI2Q9Y5P3 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAI2Q9Y5P3 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms