Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 KRT18P27-201ENST00000427733 1299 ntBASIC13.16□□□□□ -0.3
KCNIP3Q9Y2W7 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
KCNIP3Q9Y2W7 AC021087.4-201ENST00000563761 564 ntBASIC13.16□□□□□ -0.3
KCNIP3Q9Y2W7 AC087388.1-201ENST00000571370 1112 ntBASIC13.16□□□□□ -0.3
KCNIP3Q9Y2W7 PNMT-203ENST00000581428 677 ntTSL 2 BASIC13.16□□□□□ -0.3
KCNIP3Q9Y2W7 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC13.16□□□□□ -0.3
KCNIP3Q9Y2W7 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC13.16□□□□□ -0.3
KCNIP3Q9Y2W7 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC13.16□□□□□ -0.3
KCNIP3Q9Y2W7 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
KCNIP3Q9Y2W7 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.16□□□□□ -0.3
KCNIP3Q9Y2W7 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
KCNIP3Q9Y2W7 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.16□□□□□ -0.3
KCNIP3Q9Y2W7 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
KCNIP3Q9Y2W7 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
KCNIP3Q9Y2W7 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
KCNIP3Q9Y2W7 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
KCNIP3Q9Y2W7 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
KCNIP3Q9Y2W7 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
KCNIP3Q9Y2W7 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
KCNIP3Q9Y2W7 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
KCNIP3Q9Y2W7 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
KCNIP3Q9Y2W7 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
KCNIP3Q9Y2W7 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
KCNIP3Q9Y2W7 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
KCNIP3Q9Y2W7 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.16□□□□□ -0.3
KCNIP3Q9Y2W7 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.16□□□□□ -0.3
KCNIP3Q9Y2W7 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
KCNIP3Q9Y2W7 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
KCNIP3Q9Y2W7 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
KCNIP3Q9Y2W7 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
KCNIP3Q9Y2W7 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
KCNIP3Q9Y2W7 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
KCNIP3Q9Y2W7 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.15□□□□□ -0.3
KCNIP3Q9Y2W7 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
KCNIP3Q9Y2W7 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
KCNIP3Q9Y2W7 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
KCNIP3Q9Y2W7 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.15□□□□□ -0.3
KCNIP3Q9Y2W7 AJ011931.1-201ENST00000618749 2492 ntBASIC13.15□□□□□ -0.3
KCNIP3Q9Y2W7 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
KCNIP3Q9Y2W7 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
KCNIP3Q9Y2W7 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
KCNIP3Q9Y2W7 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
KCNIP3Q9Y2W7 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
KCNIP3Q9Y2W7 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.15□□□□□ -0.3
KCNIP3Q9Y2W7 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
KCNIP3Q9Y2W7 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
KCNIP3Q9Y2W7 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
KCNIP3Q9Y2W7 AC073621.1-201ENST00000392730 636 ntBASIC13.15□□□□□ -0.3
KCNIP3Q9Y2W7 GPX1P2-201ENST00000429271 606 ntBASIC13.15□□□□□ -0.3
KCNIP3Q9Y2W7 AL513480.1-201ENST00000451731 511 ntBASIC13.15□□□□□ -0.3
KCNIP3Q9Y2W7 CXCL1P1-201ENST00000502804 216 ntBASIC13.15□□□□□ -0.3
KCNIP3Q9Y2W7 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC13.15□□□□□ -0.3
KCNIP3Q9Y2W7 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC13.15□□□□□ -0.3
KCNIP3Q9Y2W7 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC13.15□□□□□ -0.3
KCNIP3Q9Y2W7 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
KCNIP3Q9Y2W7 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.15□□□□□ -0.3
KCNIP3Q9Y2W7 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC13.15□□□□□ -0.3
KCNIP3Q9Y2W7 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC13.15□□□□□ -0.3
KCNIP3Q9Y2W7 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC13.15□□□□□ -0.3
KCNIP3Q9Y2W7 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
KCNIP3Q9Y2W7 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
KCNIP3Q9Y2W7 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
KCNIP3Q9Y2W7 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC13.15□□□□□ -0.3
KCNIP3Q9Y2W7 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.15□□□□□ -0.3
KCNIP3Q9Y2W7 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.15□□□□□ -0.3
KCNIP3Q9Y2W7 AC009090.5-201ENST00000624886 2285 ntBASIC13.15□□□□□ -0.3
KCNIP3Q9Y2W7 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
KCNIP3Q9Y2W7 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.15□□□□□ -0.3
KCNIP3Q9Y2W7 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC13.15□□□□□ -0.3
KCNIP3Q9Y2W7 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
KCNIP3Q9Y2W7 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.15□□□□□ -0.3
KCNIP3Q9Y2W7 ZBED1P1-201ENST00000502364 1930 ntBASIC13.15□□□□□ -0.3
KCNIP3Q9Y2W7 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
KCNIP3Q9Y2W7 AC079781.5-202ENST00000641784 3743 ntBASIC13.15□□□□□ -0.3
KCNIP3Q9Y2W7 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
KCNIP3Q9Y2W7 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
KCNIP3Q9Y2W7 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
KCNIP3Q9Y2W7 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC13.15□□□□□ -0.31
KCNIP3Q9Y2W7 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.15□□□□□ -0.31
KCNIP3Q9Y2W7 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
KCNIP3Q9Y2W7 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
KCNIP3Q9Y2W7 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
KCNIP3Q9Y2W7 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
KCNIP3Q9Y2W7 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
KCNIP3Q9Y2W7 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
KCNIP3Q9Y2W7 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.14□□□□□ -0.31
KCNIP3Q9Y2W7 AC023024.2-201ENST00000623561 1993 ntBASIC13.14□□□□□ -0.31
KCNIP3Q9Y2W7 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.14□□□□□ -0.31
KCNIP3Q9Y2W7 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
KCNIP3Q9Y2W7 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
KCNIP3Q9Y2W7 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
KCNIP3Q9Y2W7 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
KCNIP3Q9Y2W7 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
KCNIP3Q9Y2W7 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
KCNIP3Q9Y2W7 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
KCNIP3Q9Y2W7 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
KCNIP3Q9Y2W7 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
KCNIP3Q9Y2W7 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.14□□□□□ -0.31
KCNIP3Q9Y2W7 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.14□□□□□ -0.31
KCNIP3Q9Y2W7 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms