Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.85■□□□□ 0.29
SSX2IPQ9Y2D8 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
SSX2IPQ9Y2D8 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
SSX2IPQ9Y2D8 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SSX2IPQ9Y2D8 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
SSX2IPQ9Y2D8 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SSX2IPQ9Y2D8 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SSX2IPQ9Y2D8 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
SSX2IPQ9Y2D8 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.84■□□□□ 0.29
SSX2IPQ9Y2D8 REXO1L8P-201ENST00000604378 1897 ntBASIC16.84■□□□□ 0.29
SSX2IPQ9Y2D8 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.84■□□□□ 0.29
SSX2IPQ9Y2D8 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.84■□□□□ 0.29
SSX2IPQ9Y2D8 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
SSX2IPQ9Y2D8 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SSX2IPQ9Y2D8 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SSX2IPQ9Y2D8 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SSX2IPQ9Y2D8 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.84■□□□□ 0.29
SSX2IPQ9Y2D8 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SSX2IPQ9Y2D8 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SSX2IPQ9Y2D8 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC16.84■□□□□ 0.29
SSX2IPQ9Y2D8 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SSX2IPQ9Y2D8 AC074338.1-201ENST00000416825 156 ntBASIC16.84■□□□□ 0.29
SSX2IPQ9Y2D8 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.84■□□□□ 0.29
SSX2IPQ9Y2D8 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC16.84■□□□□ 0.29
SSX2IPQ9Y2D8 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.84■□□□□ 0.29
SSX2IPQ9Y2D8 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC16.84■□□□□ 0.29
SSX2IPQ9Y2D8 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.84■□□□□ 0.29
SSX2IPQ9Y2D8 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.84■□□□□ 0.29
SSX2IPQ9Y2D8 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.84■□□□□ 0.29
SSX2IPQ9Y2D8 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC16.84■□□□□ 0.29
SSX2IPQ9Y2D8 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SSX2IPQ9Y2D8 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC16.84■□□□□ 0.29
SSX2IPQ9Y2D8 AL450472.2-201ENST00000603663 1156 ntBASIC16.84■□□□□ 0.29
SSX2IPQ9Y2D8 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.84■□□□□ 0.29
SSX2IPQ9Y2D8 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
SSX2IPQ9Y2D8 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SSX2IPQ9Y2D8 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SSX2IPQ9Y2D8 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SSX2IPQ9Y2D8 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SSX2IPQ9Y2D8 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.84■□□□□ 0.29
SSX2IPQ9Y2D8 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SSX2IPQ9Y2D8 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.84■□□□□ 0.29
SSX2IPQ9Y2D8 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SSX2IPQ9Y2D8 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SSX2IPQ9Y2D8 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SSX2IPQ9Y2D8 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SSX2IPQ9Y2D8 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.84■□□□□ 0.29
SSX2IPQ9Y2D8 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.84■□□□□ 0.29
SSX2IPQ9Y2D8 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SSX2IPQ9Y2D8 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SSX2IPQ9Y2D8 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SSX2IPQ9Y2D8 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SSX2IPQ9Y2D8 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SSX2IPQ9Y2D8 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
SSX2IPQ9Y2D8 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
SSX2IPQ9Y2D8 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SSX2IPQ9Y2D8 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SSX2IPQ9Y2D8 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.84■□□□□ 0.29
SSX2IPQ9Y2D8 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
SSX2IPQ9Y2D8 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.84■□□□□ 0.29
SSX2IPQ9Y2D8 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SSX2IPQ9Y2D8 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
SSX2IPQ9Y2D8 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
SSX2IPQ9Y2D8 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SSX2IPQ9Y2D8 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
SSX2IPQ9Y2D8 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SSX2IPQ9Y2D8 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SSX2IPQ9Y2D8 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
SSX2IPQ9Y2D8 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SSX2IPQ9Y2D8 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.83■□□□□ 0.29
SSX2IPQ9Y2D8 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SSX2IPQ9Y2D8 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SSX2IPQ9Y2D8 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SSX2IPQ9Y2D8 AL365209.1-201ENST00000624418 6473 ntBASIC16.83■□□□□ 0.29
SSX2IPQ9Y2D8 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SSX2IPQ9Y2D8 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SSX2IPQ9Y2D8 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
SSX2IPQ9Y2D8 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SSX2IPQ9Y2D8 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
SSX2IPQ9Y2D8 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SSX2IPQ9Y2D8 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SSX2IPQ9Y2D8 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SSX2IPQ9Y2D8 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SSX2IPQ9Y2D8 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.83■□□□□ 0.28
SSX2IPQ9Y2D8 KLF2P4-201ENST00000451959 1225 ntBASIC16.83■□□□□ 0.28
SSX2IPQ9Y2D8 AC119751.2-201ENST00000504529 210 ntBASIC16.83■□□□□ 0.28
SSX2IPQ9Y2D8 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC16.83■□□□□ 0.28
SSX2IPQ9Y2D8 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.83■□□□□ 0.28
SSX2IPQ9Y2D8 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
SSX2IPQ9Y2D8 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC16.83■□□□□ 0.28
SSX2IPQ9Y2D8 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
SSX2IPQ9Y2D8 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC16.83■□□□□ 0.28
SSX2IPQ9Y2D8 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
SSX2IPQ9Y2D8 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.83■□□□□ 0.28
SSX2IPQ9Y2D8 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16.83■□□□□ 0.28
SSX2IPQ9Y2D8 AL359711.2-201ENST00000563105 872 ntBASIC16.83■□□□□ 0.28
SSX2IPQ9Y2D8 MIR5189-201ENST00000577370 114 ntBASIC16.83■□□□□ 0.28
SSX2IPQ9Y2D8 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC16.83■□□□□ 0.28
SSX2IPQ9Y2D8 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.83■□□□□ 0.28
SSX2IPQ9Y2D8 AL662844.4-201ENST00000606367 2838 ntBASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms