Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZC3H4Q9UPT8 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ZC3H4Q9UPT8 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZC3H4Q9UPT8 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC18.71■□□□□ 0.59
ZC3H4Q9UPT8 CHMP1AP1-201ENST00000445563 662 ntBASIC18.71■□□□□ 0.59
ZC3H4Q9UPT8 TUBB8P8-201ENST00000458717 1058 ntBASIC18.71■□□□□ 0.59
ZC3H4Q9UPT8 CTBP2P4-201ENST00000513884 920 ntBASIC18.71■□□□□ 0.59
ZC3H4Q9UPT8 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC18.71■□□□□ 0.59
ZC3H4Q9UPT8 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC18.71■□□□□ 0.59
ZC3H4Q9UPT8 RN7SL163P-201ENST00000583100 276 ntBASIC18.71■□□□□ 0.59
ZC3H4Q9UPT8 RPS15-205ENST00000586686 562 ntTSL 5 BASIC18.71■□□□□ 0.59
ZC3H4Q9UPT8 RPS15-208ENST00000591804 711 ntTSL 5 BASIC18.71■□□□□ 0.59
ZC3H4Q9UPT8 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZC3H4Q9UPT8 AC132192.2-201ENST00000596206 1147 ntBASIC18.71■□□□□ 0.59
ZC3H4Q9UPT8 AP001065.2-201ENST00000617205 644 ntBASIC18.71■□□□□ 0.59
ZC3H4Q9UPT8 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.58
ZC3H4Q9UPT8 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
ZC3H4Q9UPT8 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZC3H4Q9UPT8 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC18.7■□□□□ 0.58
ZC3H4Q9UPT8 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZC3H4Q9UPT8 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
ZC3H4Q9UPT8 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.7■□□□□ 0.58
ZC3H4Q9UPT8 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC18.7■□□□□ 0.58
ZC3H4Q9UPT8 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.7■□□□□ 0.58
ZC3H4Q9UPT8 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC18.7■□□□□ 0.58
ZC3H4Q9UPT8 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ZC3H4Q9UPT8 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZC3H4Q9UPT8 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
ZC3H4Q9UPT8 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZC3H4Q9UPT8 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
ZC3H4Q9UPT8 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZC3H4Q9UPT8 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZC3H4Q9UPT8 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC18.7■□□□□ 0.58
ZC3H4Q9UPT8 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.7■□□□□ 0.58
ZC3H4Q9UPT8 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC18.7■□□□□ 0.58
ZC3H4Q9UPT8 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZC3H4Q9UPT8 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZC3H4Q9UPT8 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZC3H4Q9UPT8 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC18.7■□□□□ 0.58
ZC3H4Q9UPT8 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZC3H4Q9UPT8 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
ZC3H4Q9UPT8 PDIA3P2-201ENST00000428073 158 ntBASIC18.7■□□□□ 0.58
ZC3H4Q9UPT8 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC18.7■□□□□ 0.58
ZC3H4Q9UPT8 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC18.7■□□□□ 0.58
ZC3H4Q9UPT8 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC18.7■□□□□ 0.58
ZC3H4Q9UPT8 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC18.7■□□□□ 0.58
ZC3H4Q9UPT8 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZC3H4Q9UPT8 AC242376.1-201ENST00000559033 726 ntBASIC18.7■□□□□ 0.58
ZC3H4Q9UPT8 EID1-202ENST00000560490 584 ntTSL 3 BASIC18.7■□□□□ 0.58
ZC3H4Q9UPT8 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC18.7■□□□□ 0.58
ZC3H4Q9UPT8 WDR7-208ENST00000589935 544 ntTSL 4 BASIC18.7■□□□□ 0.58
ZC3H4Q9UPT8 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZC3H4Q9UPT8 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZC3H4Q9UPT8 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC18.7■□□□□ 0.58
ZC3H4Q9UPT8 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC18.7■□□□□ 0.58
ZC3H4Q9UPT8 GPR39-203ENST00000622084 900 ntTSL 5 BASIC18.7■□□□□ 0.58
ZC3H4Q9UPT8 AC004923.1-202ENST00000642106 209 ntBASIC18.7■□□□□ 0.58
ZC3H4Q9UPT8 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
ZC3H4Q9UPT8 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZC3H4Q9UPT8 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
ZC3H4Q9UPT8 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
ZC3H4Q9UPT8 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC18.7■□□□□ 0.58
ZC3H4Q9UPT8 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZC3H4Q9UPT8 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ZC3H4Q9UPT8 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZC3H4Q9UPT8 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.69■□□□□ 0.58
ZC3H4Q9UPT8 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ZC3H4Q9UPT8 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ZC3H4Q9UPT8 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC18.69■□□□□ 0.58
ZC3H4Q9UPT8 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZC3H4Q9UPT8 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZC3H4Q9UPT8 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ZC3H4Q9UPT8 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZC3H4Q9UPT8 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
ZC3H4Q9UPT8 AC148477.4-201ENST00000613430 1793 ntBASIC18.69■□□□□ 0.58
ZC3H4Q9UPT8 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC18.69■□□□□ 0.58
ZC3H4Q9UPT8 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC18.69■□□□□ 0.58
ZC3H4Q9UPT8 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
ZC3H4Q9UPT8 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC18.69■□□□□ 0.58
ZC3H4Q9UPT8 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZC3H4Q9UPT8 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
ZC3H4Q9UPT8 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ZC3H4Q9UPT8 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZC3H4Q9UPT8 AL136309.1-201ENST00000403917 691 ntBASIC18.69■□□□□ 0.58
ZC3H4Q9UPT8 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ZC3H4Q9UPT8 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
ZC3H4Q9UPT8 AC125604.1-201ENST00000496255 707 ntBASIC18.69■□□□□ 0.58
ZC3H4Q9UPT8 AC116345.2-201ENST00000512837 523 ntBASIC18.69■□□□□ 0.58
ZC3H4Q9UPT8 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
ZC3H4Q9UPT8 PTK2-225ENST00000520892 571 ntTSL 4 BASIC18.69■□□□□ 0.58
ZC3H4Q9UPT8 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC18.69■□□□□ 0.58
ZC3H4Q9UPT8 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC18.69■□□□□ 0.58
ZC3H4Q9UPT8 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC18.69■□□□□ 0.58
ZC3H4Q9UPT8 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC18.69■□□□□ 0.58
ZC3H4Q9UPT8 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
ZC3H4Q9UPT8 AL805961.1-201ENST00000642026 753 ntBASIC18.69■□□□□ 0.58
ZC3H4Q9UPT8 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
ZC3H4Q9UPT8 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
ZC3H4Q9UPT8 PCDHA14-201ENST00000506751 2298 ntBASIC18.69■□□□□ 0.58
ZC3H4Q9UPT8 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms