Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP4E1Q9UPM8 AC004840.1-201ENST00000636359 365 ntBASIC16.23■□□□□ 0.19
AP4E1Q9UPM8 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
AP4E1Q9UPM8 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP4E1Q9UPM8 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
AP4E1Q9UPM8 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
AP4E1Q9UPM8 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP4E1Q9UPM8 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
AP4E1Q9UPM8 AC023157.3-201ENST00000619086 2088 ntBASIC16.23■□□□□ 0.19
AP4E1Q9UPM8 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP4E1Q9UPM8 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP4E1Q9UPM8 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
AP4E1Q9UPM8 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.23■□□□□ 0.19
AP4E1Q9UPM8 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
AP4E1Q9UPM8 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
AP4E1Q9UPM8 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
AP4E1Q9UPM8 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
AP4E1Q9UPM8 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.22■□□□□ 0.19
AP4E1Q9UPM8 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.22■□□□□ 0.19
AP4E1Q9UPM8 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP4E1Q9UPM8 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.22■□□□□ 0.19
AP4E1Q9UPM8 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP4E1Q9UPM8 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
AP4E1Q9UPM8 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
AP4E1Q9UPM8 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
AP4E1Q9UPM8 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
AP4E1Q9UPM8 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP4E1Q9UPM8 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.22■□□□□ 0.19
AP4E1Q9UPM8 DBET-201ENST00000630918 3363 ntBASIC16.22■□□□□ 0.19
AP4E1Q9UPM8 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP4E1Q9UPM8 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP4E1Q9UPM8 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.22■□□□□ 0.19
AP4E1Q9UPM8 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP4E1Q9UPM8 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.22■□□□□ 0.19
AP4E1Q9UPM8 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
AP4E1Q9UPM8 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
AP4E1Q9UPM8 AL133267.1-201ENST00000398220 340 ntBASIC16.22■□□□□ 0.19
AP4E1Q9UPM8 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.22■□□□□ 0.19
AP4E1Q9UPM8 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.22■□□□□ 0.19
AP4E1Q9UPM8 FAM8A3P-201ENST00000427218 844 ntBASIC16.22■□□□□ 0.19
AP4E1Q9UPM8 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.22■□□□□ 0.19
AP4E1Q9UPM8 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.22■□□□□ 0.19
AP4E1Q9UPM8 KRT18P43-201ENST00000469825 1281 ntBASIC16.22■□□□□ 0.19
AP4E1Q9UPM8 SPDYE18-201ENST00000510091 1050 ntBASIC16.22■□□□□ 0.19
AP4E1Q9UPM8 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP4E1Q9UPM8 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.22■□□□□ 0.19
AP4E1Q9UPM8 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
AP4E1Q9UPM8 AC135586.1-201ENST00000539323 574 ntBASIC16.22■□□□□ 0.19
AP4E1Q9UPM8 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
AP4E1Q9UPM8 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.22■□□□□ 0.19
AP4E1Q9UPM8 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.22■□□□□ 0.19
AP4E1Q9UPM8 AC027796.2-201ENST00000575326 344 ntBASIC16.22■□□□□ 0.19
AP4E1Q9UPM8 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.22■□□□□ 0.19
AP4E1Q9UPM8 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
AP4E1Q9UPM8 AL121723.1-201ENST00000445194 1519 ntBASIC16.22■□□□□ 0.19
AP4E1Q9UPM8 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.22■□□□□ 0.19
AP4E1Q9UPM8 KRT8P44-201ENST00000441609 1350 ntBASIC16.22■□□□□ 0.19
AP4E1Q9UPM8 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP4E1Q9UPM8 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.22■□□□□ 0.19
AP4E1Q9UPM8 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP4E1Q9UPM8 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP4E1Q9UPM8 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP4E1Q9UPM8 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
AP4E1Q9UPM8 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
AP4E1Q9UPM8 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.21■□□□□ 0.19
AP4E1Q9UPM8 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP4E1Q9UPM8 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
AP4E1Q9UPM8 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP4E1Q9UPM8 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP4E1Q9UPM8 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.21■□□□□ 0.19
AP4E1Q9UPM8 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.21■□□□□ 0.19
AP4E1Q9UPM8 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.21■□□□□ 0.19
AP4E1Q9UPM8 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.21■□□□□ 0.19
AP4E1Q9UPM8 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
AP4E1Q9UPM8 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP4E1Q9UPM8 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
AP4E1Q9UPM8 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP4E1Q9UPM8 RPL5P21-201ENST00000404620 815 ntBASIC16.21■□□□□ 0.19
AP4E1Q9UPM8 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP4E1Q9UPM8 MRPS18AP1-201ENST00000414458 589 ntBASIC16.21■□□□□ 0.19
AP4E1Q9UPM8 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.21■□□□□ 0.19
AP4E1Q9UPM8 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP4E1Q9UPM8 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.21■□□□□ 0.19
AP4E1Q9UPM8 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.21■□□□□ 0.19
AP4E1Q9UPM8 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.21■□□□□ 0.19
AP4E1Q9UPM8 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
AP4E1Q9UPM8 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.21■□□□□ 0.19
AP4E1Q9UPM8 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.21■□□□□ 0.19
AP4E1Q9UPM8 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
AP4E1Q9UPM8 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
AP4E1Q9UPM8 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
AP4E1Q9UPM8 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.21■□□□□ 0.19
AP4E1Q9UPM8 AC138969.3-201ENST00000546612 1459 ntBASIC16.21■□□□□ 0.19
AP4E1Q9UPM8 AC138932.2-201ENST00000548268 1459 ntBASIC16.21■□□□□ 0.19
AP4E1Q9UPM8 AC126755.4-201ENST00000549796 1459 ntBASIC16.21■□□□□ 0.19
AP4E1Q9UPM8 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP4E1Q9UPM8 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
AP4E1Q9UPM8 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.21■□□□□ 0.19
AP4E1Q9UPM8 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
AP4E1Q9UPM8 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms