Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 RNMTL1P1-201ENST00000454103 560 ntBASIC19.61■□□□□ 0.73
SCN11AQ9UI33 UPF3AP2-201ENST00000457924 1132 ntBASIC19.61■□□□□ 0.73
SCN11AQ9UI33 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC19.61■□□□□ 0.73
SCN11AQ9UI33 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SCN11AQ9UI33 CSH2-206ENST00000560142 749 ntTSL 5 BASIC19.61■□□□□ 0.73
SCN11AQ9UI33 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC19.61■□□□□ 0.73
SCN11AQ9UI33 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC19.61■□□□□ 0.73
SCN11AQ9UI33 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC19.61■□□□□ 0.73
SCN11AQ9UI33 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SCN11AQ9UI33 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SCN11AQ9UI33 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC19.61■□□□□ 0.73
SCN11AQ9UI33 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.6■□□□□ 0.73
SCN11AQ9UI33 WARS-232ENST00000556645 2508 ntTSL 5 BASIC19.6■□□□□ 0.73
SCN11AQ9UI33 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
SCN11AQ9UI33 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCN11AQ9UI33 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCN11AQ9UI33 FNTAP2-201ENST00000430308 634 ntBASIC19.6■□□□□ 0.73
SCN11AQ9UI33 AC005324.6-201ENST00000587972 613 ntBASIC19.6■□□□□ 0.73
SCN11AQ9UI33 BNIP3P13-201ENST00000599968 566 ntBASIC19.6■□□□□ 0.73
SCN11AQ9UI33 AC015967.2-201ENST00000624092 234 ntBASIC19.6■□□□□ 0.73
SCN11AQ9UI33 AC006435.4-201ENST00000625037 234 ntBASIC19.6■□□□□ 0.73
SCN11AQ9UI33 AL356737.1-201ENST00000634391 234 ntBASIC19.6■□□□□ 0.73
SCN11AQ9UI33 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC19.6■□□□□ 0.73
SCN11AQ9UI33 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SCN11AQ9UI33 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCN11AQ9UI33 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC19.6■□□□□ 0.73
SCN11AQ9UI33 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
SCN11AQ9UI33 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC19.6■□□□□ 0.73
SCN11AQ9UI33 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCN11AQ9UI33 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SCN11AQ9UI33 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCN11AQ9UI33 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
SCN11AQ9UI33 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC19.6■□□□□ 0.73
SCN11AQ9UI33 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC19.6■□□□□ 0.73
SCN11AQ9UI33 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCN11AQ9UI33 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC19.6■□□□□ 0.73
SCN11AQ9UI33 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
SCN11AQ9UI33 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SCN11AQ9UI33 ATP6V0CP2-201ENST00000469409 207 ntBASIC19.6■□□□□ 0.73
SCN11AQ9UI33 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC19.6■□□□□ 0.73
SCN11AQ9UI33 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC19.6■□□□□ 0.73
SCN11AQ9UI33 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SCN11AQ9UI33 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC19.6■□□□□ 0.73
SCN11AQ9UI33 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC19.6■□□□□ 0.73
SCN11AQ9UI33 Z98259.2-201ENST00000641583 609 ntBASIC19.6■□□□□ 0.73
SCN11AQ9UI33 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SCN11AQ9UI33 AC092850.2-201ENST00000623821 2697 ntBASIC19.59■□□□□ 0.73
SCN11AQ9UI33 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SCN11AQ9UI33 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SCN11AQ9UI33 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC19.59■□□□□ 0.73
SCN11AQ9UI33 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
SCN11AQ9UI33 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC19.59■□□□□ 0.73
SCN11AQ9UI33 API5-202ENST00000420461 2009 ntTSL 2 BASIC19.59■□□□□ 0.73
SCN11AQ9UI33 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SCN11AQ9UI33 SHC1P1-201ENST00000425230 1745 ntBASIC19.59■□□□□ 0.73
SCN11AQ9UI33 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SCN11AQ9UI33 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SCN11AQ9UI33 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC19.59■□□□□ 0.73
SCN11AQ9UI33 AL008718.2-201ENST00000609206 1313 ntBASIC19.59■□□□□ 0.73
SCN11AQ9UI33 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC19.59■□□□□ 0.73
SCN11AQ9UI33 RN7SKP230-201ENST00000365642 335 ntBASIC19.59■□□□□ 0.73
SCN11AQ9UI33 KRTAP19-9P-201ENST00000421795 191 ntBASIC19.59■□□□□ 0.73
SCN11AQ9UI33 IMP3P2-201ENST00000489760 475 ntBASIC19.59■□□□□ 0.73
SCN11AQ9UI33 AC106794.1-201ENST00000506935 792 ntBASIC19.59■□□□□ 0.73
SCN11AQ9UI33 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
SCN11AQ9UI33 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC19.59■□□□□ 0.73
SCN11AQ9UI33 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SCN11AQ9UI33 KLK3-207ENST00000595952 969 ntTSL 3 BASIC19.59■□□□□ 0.73
SCN11AQ9UI33 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC19.59■□□□□ 0.73
SCN11AQ9UI33 AL023803.2-201ENST00000620080 638 ntBASIC19.59■□□□□ 0.73
SCN11AQ9UI33 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC19.59■□□□□ 0.73
SCN11AQ9UI33 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SCN11AQ9UI33 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SCN11AQ9UI33 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC19.59■□□□□ 0.73
SCN11AQ9UI33 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
SCN11AQ9UI33 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC19.59■□□□□ 0.73
SCN11AQ9UI33 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SCN11AQ9UI33 AL139384.1-201ENST00000612143 3047 ntBASIC19.58■□□□□ 0.73
SCN11AQ9UI33 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC19.58■□□□□ 0.73
SCN11AQ9UI33 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC19.58■□□□□ 0.73
SCN11AQ9UI33 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC19.58■□□□□ 0.73
SCN11AQ9UI33 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SCN11AQ9UI33 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SCN11AQ9UI33 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SCN11AQ9UI33 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SCN11AQ9UI33 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC19.58■□□□□ 0.73
SCN11AQ9UI33 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC19.58■□□□□ 0.73
SCN11AQ9UI33 AF254983.2-201ENST00000612331 135 ntBASIC19.58■□□□□ 0.73
SCN11AQ9UI33 AC004899.1-201ENST00000424687 1714 ntBASIC19.58■□□□□ 0.73
SCN11AQ9UI33 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC19.58■□□□□ 0.72
SCN11AQ9UI33 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SCN11AQ9UI33 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SCN11AQ9UI33 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC19.58■□□□□ 0.72
SCN11AQ9UI33 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SCN11AQ9UI33 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC19.58■□□□□ 0.72
SCN11AQ9UI33 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC19.58■□□□□ 0.72
SCN11AQ9UI33 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SCN11AQ9UI33 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SCN11AQ9UI33 AC087481.3-201ENST00000602886 1894 ntBASIC19.58■□□□□ 0.72
SCN11AQ9UI33 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms