Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SALL1Q9NSC2 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SALL1Q9NSC2 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SALL1Q9NSC2 AC022532.1-201ENST00000624563 1728 ntBASIC18.66■□□□□ 0.58
SALL1Q9NSC2 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SALL1Q9NSC2 AC020658.6-201ENST00000623564 1870 ntBASIC18.66■□□□□ 0.58
SALL1Q9NSC2 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC18.66■□□□□ 0.58
SALL1Q9NSC2 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SALL1Q9NSC2 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC18.65■□□□□ 0.58
SALL1Q9NSC2 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC18.65■□□□□ 0.58
SALL1Q9NSC2 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SALL1Q9NSC2 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SALL1Q9NSC2 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
SALL1Q9NSC2 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SALL1Q9NSC2 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC18.65■□□□□ 0.58
SALL1Q9NSC2 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
SALL1Q9NSC2 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SALL1Q9NSC2 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SALL1Q9NSC2 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SALL1Q9NSC2 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SALL1Q9NSC2 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SALL1Q9NSC2 AC006001.1-201ENST00000325130 474 ntBASIC18.65■□□□□ 0.58
SALL1Q9NSC2 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SALL1Q9NSC2 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SALL1Q9NSC2 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SALL1Q9NSC2 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SALL1Q9NSC2 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC18.65■□□□□ 0.58
SALL1Q9NSC2 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SALL1Q9NSC2 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SALL1Q9NSC2 AL645937.2-201ENST00000396808 931 ntBASIC18.65■□□□□ 0.58
SALL1Q9NSC2 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC18.65■□□□□ 0.58
SALL1Q9NSC2 KLF2P2-201ENST00000416807 1039 ntBASIC18.65■□□□□ 0.58
SALL1Q9NSC2 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC18.65■□□□□ 0.58
SALL1Q9NSC2 AL355994.2-201ENST00000447882 704 ntBASIC18.65■□□□□ 0.58
SALL1Q9NSC2 AC114812.1-204ENST00000449669 728 ntBASIC18.65■□□□□ 0.58
SALL1Q9NSC2 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC18.65■□□□□ 0.58
SALL1Q9NSC2 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC18.65■□□□□ 0.58
SALL1Q9NSC2 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SALL1Q9NSC2 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SALL1Q9NSC2 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC18.65■□□□□ 0.58
SALL1Q9NSC2 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC18.65■□□□□ 0.58
SALL1Q9NSC2 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC18.65■□□□□ 0.58
SALL1Q9NSC2 AC132938.4-201ENST00000623835 848 ntBASIC18.65■□□□□ 0.58
SALL1Q9NSC2 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC18.65■□□□□ 0.58
SALL1Q9NSC2 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SALL1Q9NSC2 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SALL1Q9NSC2 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SALL1Q9NSC2 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC18.64■□□□□ 0.58
SALL1Q9NSC2 MBP-202ENST00000355994 2772 ntTSL 5 BASIC18.64■□□□□ 0.58
SALL1Q9NSC2 CICP13-201ENST00000422015 2789 ntBASIC18.64■□□□□ 0.58
SALL1Q9NSC2 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
SALL1Q9NSC2 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
SALL1Q9NSC2 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
SALL1Q9NSC2 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC18.64■□□□□ 0.58
SALL1Q9NSC2 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SALL1Q9NSC2 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SALL1Q9NSC2 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SALL1Q9NSC2 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SALL1Q9NSC2 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SALL1Q9NSC2 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC18.64■□□□□ 0.57
SALL1Q9NSC2 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC18.64■□□□□ 0.57
SALL1Q9NSC2 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC18.64■□□□□ 0.57
SALL1Q9NSC2 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
SALL1Q9NSC2 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SALL1Q9NSC2 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SALL1Q9NSC2 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC18.64■□□□□ 0.57
SALL1Q9NSC2 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC18.64■□□□□ 0.57
SALL1Q9NSC2 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SALL1Q9NSC2 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SALL1Q9NSC2 TPO-206ENST00000382269 1155 ntTSL 5 BASIC18.64■□□□□ 0.57
SALL1Q9NSC2 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC18.64■□□□□ 0.57
SALL1Q9NSC2 MIR1908-201ENST00000410394 80 ntBASIC18.64■□□□□ 0.57
SALL1Q9NSC2 FAM21FP-201ENST00000426241 1131 ntBASIC18.64■□□□□ 0.57
SALL1Q9NSC2 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SALL1Q9NSC2 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC18.64■□□□□ 0.57
SALL1Q9NSC2 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC18.64■□□□□ 0.57
SALL1Q9NSC2 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SALL1Q9NSC2 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SALL1Q9NSC2 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SALL1Q9NSC2 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SALL1Q9NSC2 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SALL1Q9NSC2 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC18.64■□□□□ 0.57
SALL1Q9NSC2 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC18.64■□□□□ 0.57
SALL1Q9NSC2 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC18.64■□□□□ 0.57
SALL1Q9NSC2 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC18.64■□□□□ 0.57
SALL1Q9NSC2 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC18.64■□□□□ 0.57
SALL1Q9NSC2 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SALL1Q9NSC2 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SALL1Q9NSC2 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SALL1Q9NSC2 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SALL1Q9NSC2 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC18.63■□□□□ 0.57
SALL1Q9NSC2 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SALL1Q9NSC2 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SALL1Q9NSC2 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SALL1Q9NSC2 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC18.63■□□□□ 0.57
SALL1Q9NSC2 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC18.63■□□□□ 0.57
SALL1Q9NSC2 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC18.63■□□□□ 0.57
SALL1Q9NSC2 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SALL1Q9NSC2 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC18.63■□□□□ 0.57
SALL1Q9NSC2 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms