Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC10.81□□□□□ -0.68
CDC42SE2Q9NRR3 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CDC42SE2Q9NRR3 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC10.81□□□□□ -0.68
CDC42SE2Q9NRR3 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CDC42SE2Q9NRR3 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC10.81□□□□□ -0.68
CDC42SE2Q9NRR3 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CDC42SE2Q9NRR3 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
CDC42SE2Q9NRR3 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CDC42SE2Q9NRR3 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CDC42SE2Q9NRR3 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CDC42SE2Q9NRR3 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
CDC42SE2Q9NRR3 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
CDC42SE2Q9NRR3 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CDC42SE2Q9NRR3 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CDC42SE2Q9NRR3 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CDC42SE2Q9NRR3 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CDC42SE2Q9NRR3 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CDC42SE2Q9NRR3 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CDC42SE2Q9NRR3 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
CDC42SE2Q9NRR3 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC10.8□□□□□ -0.68
CDC42SE2Q9NRR3 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CDC42SE2Q9NRR3 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC10.8□□□□□ -0.68
CDC42SE2Q9NRR3 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CDC42SE2Q9NRR3 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC10.8□□□□□ -0.68
CDC42SE2Q9NRR3 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CDC42SE2Q9NRR3 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CDC42SE2Q9NRR3 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC10.8□□□□□ -0.68
CDC42SE2Q9NRR3 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CDC42SE2Q9NRR3 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
CDC42SE2Q9NRR3 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
CDC42SE2Q9NRR3 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
CDC42SE2Q9NRR3 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CDC42SE2Q9NRR3 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CDC42SE2Q9NRR3 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CDC42SE2Q9NRR3 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CDC42SE2Q9NRR3 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
CDC42SE2Q9NRR3 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
CDC42SE2Q9NRR3 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CDC42SE2Q9NRR3 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CDC42SE2Q9NRR3 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CDC42SE2Q9NRR3 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC10.8□□□□□ -0.68
CDC42SE2Q9NRR3 AC136604.1-201ENST00000418535 575 ntBASIC10.8□□□□□ -0.68
CDC42SE2Q9NRR3 FAM8A3P-201ENST00000427218 844 ntBASIC10.8□□□□□ -0.68
CDC42SE2Q9NRR3 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CDC42SE2Q9NRR3 RNA5SP416-201ENST00000516838 111 ntBASIC10.8□□□□□ -0.68
CDC42SE2Q9NRR3 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC10.8□□□□□ -0.68
CDC42SE2Q9NRR3 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CDC42SE2Q9NRR3 MAX-210ENST00000555419 765 ntTSL 5 BASIC10.8□□□□□ -0.68
CDC42SE2Q9NRR3 IGHV3OR16-6-201ENST00000568775 360 ntBASIC10.8□□□□□ -0.68
CDC42SE2Q9NRR3 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC10.8□□□□□ -0.68
CDC42SE2Q9NRR3 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC10.8□□□□□ -0.68
CDC42SE2Q9NRR3 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
CDC42SE2Q9NRR3 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC10.8□□□□□ -0.68
CDC42SE2Q9NRR3 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC10.8□□□□□ -0.68
CDC42SE2Q9NRR3 AC007191.1-201ENST00000623179 2995 ntBASIC10.8□□□□□ -0.68
CDC42SE2Q9NRR3 AC092865.6-201ENST00000642101 219 ntBASIC10.8□□□□□ -0.68
CDC42SE2Q9NRR3 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CDC42SE2Q9NRR3 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
CDC42SE2Q9NRR3 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
CDC42SE2Q9NRR3 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CDC42SE2Q9NRR3 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC10.8□□□□□ -0.68
CDC42SE2Q9NRR3 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CDC42SE2Q9NRR3 AL607033.1-201ENST00000623900 1599 ntBASIC10.8□□□□□ -0.68
CDC42SE2Q9NRR3 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
CDC42SE2Q9NRR3 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC10.8□□□□□ -0.68
CDC42SE2Q9NRR3 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CDC42SE2Q9NRR3 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CDC42SE2Q9NRR3 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC10.8□□□□□ -0.68
CDC42SE2Q9NRR3 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC10.8□□□□□ -0.68
CDC42SE2Q9NRR3 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CDC42SE2Q9NRR3 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
CDC42SE2Q9NRR3 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CDC42SE2Q9NRR3 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
CDC42SE2Q9NRR3 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
CDC42SE2Q9NRR3 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC10.8□□□□□ -0.68
CDC42SE2Q9NRR3 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CDC42SE2Q9NRR3 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CDC42SE2Q9NRR3 COCH-203ENST00000460581 2688 ntTSL 2 BASIC10.8□□□□□ -0.68
CDC42SE2Q9NRR3 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CDC42SE2Q9NRR3 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
CDC42SE2Q9NRR3 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CDC42SE2Q9NRR3 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC10.79□□□□□ -0.68
CDC42SE2Q9NRR3 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CDC42SE2Q9NRR3 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CDC42SE2Q9NRR3 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CDC42SE2Q9NRR3 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CDC42SE2Q9NRR3 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CDC42SE2Q9NRR3 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC10.79□□□□□ -0.68
CDC42SE2Q9NRR3 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CDC42SE2Q9NRR3 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CDC42SE2Q9NRR3 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CDC42SE2Q9NRR3 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC10.79□□□□□ -0.68
CDC42SE2Q9NRR3 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CDC42SE2Q9NRR3 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC10.79□□□□□ -0.68
CDC42SE2Q9NRR3 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC10.79□□□□□ -0.68
CDC42SE2Q9NRR3 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
CDC42SE2Q9NRR3 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CDC42SE2Q9NRR3 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CDC42SE2Q9NRR3 KLK8-202ENST00000320838 456 ntTSL 5 BASIC10.79□□□□□ -0.68
CDC42SE2Q9NRR3 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms