Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
VAT1LQ9HCJ6 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
VAT1LQ9HCJ6 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
VAT1LQ9HCJ6 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VAT1LQ9HCJ6 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC18.09■□□□□ 0.49
VAT1LQ9HCJ6 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC18.09■□□□□ 0.49
VAT1LQ9HCJ6 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
VAT1LQ9HCJ6 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VAT1LQ9HCJ6 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
VAT1LQ9HCJ6 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
VAT1LQ9HCJ6 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
VAT1LQ9HCJ6 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC18.09■□□□□ 0.49
VAT1LQ9HCJ6 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC18.09■□□□□ 0.49
VAT1LQ9HCJ6 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC18.09■□□□□ 0.49
VAT1LQ9HCJ6 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC18.09■□□□□ 0.49
VAT1LQ9HCJ6 RN7SL837P-201ENST00000463010 287 ntBASIC18.09■□□□□ 0.49
VAT1LQ9HCJ6 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC18.09■□□□□ 0.49
VAT1LQ9HCJ6 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC18.09■□□□□ 0.49
VAT1LQ9HCJ6 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC18.09■□□□□ 0.49
VAT1LQ9HCJ6 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC18.09■□□□□ 0.49
VAT1LQ9HCJ6 BRI3BPP1-201ENST00000594224 787 ntBASIC18.09■□□□□ 0.49
VAT1LQ9HCJ6 AL049840.4-201ENST00000602422 811 ntBASIC18.09■□□□□ 0.49
VAT1LQ9HCJ6 AC133539.2-201ENST00000604757 467 ntBASIC18.09■□□□□ 0.49
VAT1LQ9HCJ6 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VAT1LQ9HCJ6 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
VAT1LQ9HCJ6 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC18.09■□□□□ 0.49
VAT1LQ9HCJ6 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VAT1LQ9HCJ6 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
VAT1LQ9HCJ6 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VAT1LQ9HCJ6 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
VAT1LQ9HCJ6 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
VAT1LQ9HCJ6 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
VAT1LQ9HCJ6 AMT-232ENST00000636199 1546 ntTSL 5 BASIC18.08■□□□□ 0.49
VAT1LQ9HCJ6 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
VAT1LQ9HCJ6 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC18.08■□□□□ 0.49
VAT1LQ9HCJ6 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC18.08■□□□□ 0.49
VAT1LQ9HCJ6 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.49
VAT1LQ9HCJ6 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
VAT1LQ9HCJ6 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.08■□□□□ 0.49
VAT1LQ9HCJ6 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
VAT1LQ9HCJ6 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
VAT1LQ9HCJ6 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
VAT1LQ9HCJ6 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
VAT1LQ9HCJ6 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VAT1LQ9HCJ6 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VAT1LQ9HCJ6 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VAT1LQ9HCJ6 AL133267.1-201ENST00000398220 340 ntBASIC18.08■□□□□ 0.48
VAT1LQ9HCJ6 PGF-202ENST00000405431 666 ntTSL 5 BASIC18.08■□□□□ 0.48
VAT1LQ9HCJ6 AL512384.1-201ENST00000406683 331 ntBASIC18.08■□□□□ 0.48
VAT1LQ9HCJ6 AC134915.1-201ENST00000426461 574 ntBASIC18.08■□□□□ 0.48
VAT1LQ9HCJ6 WBP2-203ENST00000433525 928 ntTSL 2 BASIC18.08■□□□□ 0.48
VAT1LQ9HCJ6 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC18.08■□□□□ 0.48
VAT1LQ9HCJ6 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC18.08■□□□□ 0.48
VAT1LQ9HCJ6 CFL1-212ENST00000531413 636 ntTSL 3 BASIC18.08■□□□□ 0.48
VAT1LQ9HCJ6 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
VAT1LQ9HCJ6 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC18.08■□□□□ 0.48
VAT1LQ9HCJ6 AC015910.1-201ENST00000579400 975 ntBASIC18.08■□□□□ 0.48
VAT1LQ9HCJ6 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC18.08■□□□□ 0.48
VAT1LQ9HCJ6 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VAT1LQ9HCJ6 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC18.08■□□□□ 0.48
VAT1LQ9HCJ6 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.08■□□□□ 0.48
VAT1LQ9HCJ6 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VAT1LQ9HCJ6 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC18.08■□□□□ 0.48
VAT1LQ9HCJ6 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC18.08■□□□□ 0.48
VAT1LQ9HCJ6 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VAT1LQ9HCJ6 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
VAT1LQ9HCJ6 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VAT1LQ9HCJ6 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
VAT1LQ9HCJ6 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VAT1LQ9HCJ6 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC18.08■□□□□ 0.48
VAT1LQ9HCJ6 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
VAT1LQ9HCJ6 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC18.07■□□□□ 0.48
VAT1LQ9HCJ6 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VAT1LQ9HCJ6 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VAT1LQ9HCJ6 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
VAT1LQ9HCJ6 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
VAT1LQ9HCJ6 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC18.07■□□□□ 0.48
VAT1LQ9HCJ6 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
VAT1LQ9HCJ6 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VAT1LQ9HCJ6 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC18.07■□□□□ 0.48
VAT1LQ9HCJ6 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VAT1LQ9HCJ6 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VAT1LQ9HCJ6 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
VAT1LQ9HCJ6 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VAT1LQ9HCJ6 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
VAT1LQ9HCJ6 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
VAT1LQ9HCJ6 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC18.07■□□□□ 0.48
VAT1LQ9HCJ6 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC18.07■□□□□ 0.48
VAT1LQ9HCJ6 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC18.07■□□□□ 0.48
VAT1LQ9HCJ6 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
VAT1LQ9HCJ6 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
VAT1LQ9HCJ6 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
VAT1LQ9HCJ6 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC18.07■□□□□ 0.48
VAT1LQ9HCJ6 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC18.07■□□□□ 0.48
VAT1LQ9HCJ6 AC000095.1-201ENST00000603208 874 ntBASIC18.07■□□□□ 0.48
VAT1LQ9HCJ6 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
VAT1LQ9HCJ6 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
VAT1LQ9HCJ6 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
VAT1LQ9HCJ6 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VAT1LQ9HCJ6 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms