Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHMP6Q96FZ7 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHMP6Q96FZ7 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHMP6Q96FZ7 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CHMP6Q96FZ7 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHMP6Q96FZ7 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CHMP6Q96FZ7 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHMP6Q96FZ7 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHMP6Q96FZ7 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
CHMP6Q96FZ7 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHMP6Q96FZ7 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
CHMP6Q96FZ7 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CHMP6Q96FZ7 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CHMP6Q96FZ7 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CHMP6Q96FZ7 AC018892.3-201ENST00000623986 2499 ntBASIC15.82■□□□□ 0.12
CHMP6Q96FZ7 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.82■□□□□ 0.12
CHMP6Q96FZ7 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHMP6Q96FZ7 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHMP6Q96FZ7 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CHMP6Q96FZ7 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.82■□□□□ 0.12
CHMP6Q96FZ7 RPS2P1-201ENST00000434010 821 ntBASIC15.82■□□□□ 0.12
CHMP6Q96FZ7 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.82■□□□□ 0.12
CHMP6Q96FZ7 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CHMP6Q96FZ7 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.82■□□□□ 0.12
CHMP6Q96FZ7 OR7E14P-202ENST00000530490 1290 ntBASIC15.82■□□□□ 0.12
CHMP6Q96FZ7 TOLLIP-AS1-201ENST00000530897 939 ntBASIC15.82■□□□□ 0.12
CHMP6Q96FZ7 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CHMP6Q96FZ7 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.82■□□□□ 0.12
CHMP6Q96FZ7 MIR4313-201ENST00000580760 101 ntBASIC15.82■□□□□ 0.12
CHMP6Q96FZ7 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
CHMP6Q96FZ7 AC025062.2-201ENST00000605477 670 ntBASIC15.82■□□□□ 0.12
CHMP6Q96FZ7 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.82■□□□□ 0.12
CHMP6Q96FZ7 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.82■□□□□ 0.12
CHMP6Q96FZ7 AC004706.3-202ENST00000621574 984 ntBASIC15.82■□□□□ 0.12
CHMP6Q96FZ7 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CHMP6Q96FZ7 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CHMP6Q96FZ7 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC15.82■□□□□ 0.12
CHMP6Q96FZ7 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.82■□□□□ 0.12
CHMP6Q96FZ7 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHMP6Q96FZ7 AC012569.1-201ENST00000591191 1524 ntBASIC15.82■□□□□ 0.12
CHMP6Q96FZ7 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.82■□□□□ 0.12
CHMP6Q96FZ7 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.82■□□□□ 0.12
CHMP6Q96FZ7 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHMP6Q96FZ7 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
CHMP6Q96FZ7 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.82■□□□□ 0.12
CHMP6Q96FZ7 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CHMP6Q96FZ7 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CHMP6Q96FZ7 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CHMP6Q96FZ7 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.82■□□□□ 0.12
CHMP6Q96FZ7 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHMP6Q96FZ7 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.82■□□□□ 0.12
CHMP6Q96FZ7 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CHMP6Q96FZ7 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CHMP6Q96FZ7 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHMP6Q96FZ7 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.81■□□□□ 0.12
CHMP6Q96FZ7 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHMP6Q96FZ7 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CHMP6Q96FZ7 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CHMP6Q96FZ7 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHMP6Q96FZ7 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHMP6Q96FZ7 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHMP6Q96FZ7 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHMP6Q96FZ7 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHMP6Q96FZ7 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHMP6Q96FZ7 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CHMP6Q96FZ7 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHMP6Q96FZ7 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHMP6Q96FZ7 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHMP6Q96FZ7 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHMP6Q96FZ7 ELK2BP-201ENST00000415014 1224 ntBASIC15.81■□□□□ 0.12
CHMP6Q96FZ7 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CHMP6Q96FZ7 LAGE3P1-201ENST00000425356 484 ntBASIC15.81■□□□□ 0.12
CHMP6Q96FZ7 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.81■□□□□ 0.12
CHMP6Q96FZ7 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC15.81■□□□□ 0.12
CHMP6Q96FZ7 EMBP1-201ENST00000458200 901 ntBASIC15.81■□□□□ 0.12
CHMP6Q96FZ7 UNC93B7-201ENST00000509439 705 ntBASIC15.81■□□□□ 0.12
CHMP6Q96FZ7 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.81■□□□□ 0.12
CHMP6Q96FZ7 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.81■□□□□ 0.12
CHMP6Q96FZ7 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.81■□□□□ 0.12
CHMP6Q96FZ7 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.81■□□□□ 0.12
CHMP6Q96FZ7 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.81■□□□□ 0.12
CHMP6Q96FZ7 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.81■□□□□ 0.12
CHMP6Q96FZ7 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.81■□□□□ 0.12
CHMP6Q96FZ7 BMF-207ENST00000559701 630 ntTSL 3 BASIC15.81■□□□□ 0.12
CHMP6Q96FZ7 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CHMP6Q96FZ7 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.81■□□□□ 0.12
CHMP6Q96FZ7 MIR4321-201ENST00000592276 80 ntBASIC15.81■□□□□ 0.12
CHMP6Q96FZ7 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.81■□□□□ 0.12
CHMP6Q96FZ7 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.81■□□□□ 0.12
CHMP6Q96FZ7 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC15.81■□□□□ 0.12
CHMP6Q96FZ7 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
CHMP6Q96FZ7 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.81■□□□□ 0.12
CHMP6Q96FZ7 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.81■□□□□ 0.12
CHMP6Q96FZ7 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHMP6Q96FZ7 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
CHMP6Q96FZ7 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CHMP6Q96FZ7 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.81■□□□□ 0.12
CHMP6Q96FZ7 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHMP6Q96FZ7 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHMP6Q96FZ7 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms