Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AL078644.1-201ENST00000609881 752 ntBASIC14.67□□□□□ -0.06
DEPDC4Q8N2C3 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
DEPDC4Q8N2C3 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
DEPDC4Q8N2C3 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
DEPDC4Q8N2C3 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.67□□□□□ -0.06
DEPDC4Q8N2C3 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
DEPDC4Q8N2C3 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
DEPDC4Q8N2C3 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
DEPDC4Q8N2C3 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
DEPDC4Q8N2C3 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
DEPDC4Q8N2C3 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
DEPDC4Q8N2C3 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
DEPDC4Q8N2C3 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
DEPDC4Q8N2C3 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
DEPDC4Q8N2C3 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
DEPDC4Q8N2C3 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.67□□□□□ -0.06
DEPDC4Q8N2C3 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.67□□□□□ -0.06
DEPDC4Q8N2C3 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
DEPDC4Q8N2C3 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
DEPDC4Q8N2C3 AC092127.1-201ENST00000567093 3455 ntBASIC14.67□□□□□ -0.06
DEPDC4Q8N2C3 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.66□□□□□ -0.06
DEPDC4Q8N2C3 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.66□□□□□ -0.06
DEPDC4Q8N2C3 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
DEPDC4Q8N2C3 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
DEPDC4Q8N2C3 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
DEPDC4Q8N2C3 ELL2P1-201ENST00000413990 1906 ntBASIC14.66□□□□□ -0.06
DEPDC4Q8N2C3 AL390755.1-201ENST00000623716 2027 ntBASIC14.66□□□□□ -0.06
DEPDC4Q8N2C3 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
DEPDC4Q8N2C3 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
DEPDC4Q8N2C3 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
DEPDC4Q8N2C3 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
DEPDC4Q8N2C3 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
DEPDC4Q8N2C3 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.66□□□□□ -0.06
DEPDC4Q8N2C3 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
DEPDC4Q8N2C3 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
DEPDC4Q8N2C3 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
DEPDC4Q8N2C3 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.66□□□□□ -0.06
DEPDC4Q8N2C3 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
DEPDC4Q8N2C3 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.66□□□□□ -0.06
DEPDC4Q8N2C3 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.66□□□□□ -0.06
DEPDC4Q8N2C3 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
DEPDC4Q8N2C3 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.66□□□□□ -0.06
DEPDC4Q8N2C3 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.66□□□□□ -0.06
DEPDC4Q8N2C3 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
DEPDC4Q8N2C3 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
DEPDC4Q8N2C3 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
DEPDC4Q8N2C3 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
DEPDC4Q8N2C3 AGAP7P-201ENST00000582299 2062 ntBASIC14.66□□□□□ -0.06
DEPDC4Q8N2C3 AGAP14-201ENST00000624701 2060 ntBASIC14.66□□□□□ -0.06
DEPDC4Q8N2C3 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
DEPDC4Q8N2C3 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
DEPDC4Q8N2C3 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
DEPDC4Q8N2C3 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.66□□□□□ -0.06
DEPDC4Q8N2C3 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
DEPDC4Q8N2C3 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.66□□□□□ -0.06
DEPDC4Q8N2C3 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
DEPDC4Q8N2C3 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
DEPDC4Q8N2C3 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
DEPDC4Q8N2C3 AC002056.1-201ENST00000395613 760 ntBASIC14.66□□□□□ -0.06
DEPDC4Q8N2C3 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
DEPDC4Q8N2C3 AC254562.1-201ENST00000417586 456 ntBASIC14.66□□□□□ -0.06
DEPDC4Q8N2C3 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.66□□□□□ -0.06
DEPDC4Q8N2C3 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
DEPDC4Q8N2C3 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
DEPDC4Q8N2C3 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.66□□□□□ -0.06
DEPDC4Q8N2C3 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
DEPDC4Q8N2C3 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
DEPDC4Q8N2C3 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.66□□□□□ -0.06
DEPDC4Q8N2C3 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
DEPDC4Q8N2C3 MIR3909-201ENST00000579518 119 ntBASIC14.66□□□□□ -0.06
DEPDC4Q8N2C3 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.66□□□□□ -0.06
DEPDC4Q8N2C3 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
DEPDC4Q8N2C3 AC060766.1-201ENST00000590824 627 ntBASIC14.66□□□□□ -0.06
DEPDC4Q8N2C3 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.66□□□□□ -0.06
DEPDC4Q8N2C3 AP001160.2-201ENST00000596071 487 ntBASIC14.66□□□□□ -0.06
DEPDC4Q8N2C3 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
DEPDC4Q8N2C3 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.66□□□□□ -0.06
DEPDC4Q8N2C3 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
DEPDC4Q8N2C3 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
DEPDC4Q8N2C3 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
DEPDC4Q8N2C3 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
DEPDC4Q8N2C3 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
DEPDC4Q8N2C3 PTENP1-202ENST00000532280 3996 ntBASIC14.66□□□□□ -0.06
DEPDC4Q8N2C3 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
DEPDC4Q8N2C3 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
DEPDC4Q8N2C3 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
DEPDC4Q8N2C3 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
DEPDC4Q8N2C3 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
DEPDC4Q8N2C3 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
DEPDC4Q8N2C3 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
DEPDC4Q8N2C3 AC126365.1-201ENST00000578585 1514 ntBASIC14.66□□□□□ -0.06
DEPDC4Q8N2C3 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
DEPDC4Q8N2C3 AC232323.1-201ENST00000540724 2099 ntBASIC14.65□□□□□ -0.06
DEPDC4Q8N2C3 REXO1L5P-201ENST00000622260 2098 ntBASIC14.65□□□□□ -0.06
DEPDC4Q8N2C3 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.65□□□□□ -0.06
DEPDC4Q8N2C3 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
DEPDC4Q8N2C3 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.65□□□□□ -0.06
DEPDC4Q8N2C3 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
DEPDC4Q8N2C3 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
DEPDC4Q8N2C3 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms