Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.46■□□□□ 0.07
TMEFF1Q8IYR6 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TMEFF1Q8IYR6 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
TMEFF1Q8IYR6 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
TMEFF1Q8IYR6 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
TMEFF1Q8IYR6 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
TMEFF1Q8IYR6 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
TMEFF1Q8IYR6 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TMEFF1Q8IYR6 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TMEFF1Q8IYR6 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
TMEFF1Q8IYR6 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
TMEFF1Q8IYR6 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TMEFF1Q8IYR6 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.46■□□□□ 0.07
TMEFF1Q8IYR6 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TMEFF1Q8IYR6 MTX1P1-201ENST00000440904 838 ntBASIC15.46■□□□□ 0.07
TMEFF1Q8IYR6 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
TMEFF1Q8IYR6 RNA5SP486-201ENST00000515961 83 ntBASIC15.46■□□□□ 0.07
TMEFF1Q8IYR6 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TMEFF1Q8IYR6 AC104982.3-201ENST00000581995 514 ntBASIC15.46■□□□□ 0.07
TMEFF1Q8IYR6 AL138799.1-201ENST00000448213 1675 ntBASIC15.46■□□□□ 0.07
TMEFF1Q8IYR6 AC006449.5-201ENST00000610658 2098 ntBASIC15.46■□□□□ 0.07
TMEFF1Q8IYR6 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TMEFF1Q8IYR6 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TMEFF1Q8IYR6 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.46■□□□□ 0.07
TMEFF1Q8IYR6 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TMEFF1Q8IYR6 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TMEFF1Q8IYR6 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC15.46■□□□□ 0.07
TMEFF1Q8IYR6 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TMEFF1Q8IYR6 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.46■□□□□ 0.06
TMEFF1Q8IYR6 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.46■□□□□ 0.06
TMEFF1Q8IYR6 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.46■□□□□ 0.06
TMEFF1Q8IYR6 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TMEFF1Q8IYR6 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TMEFF1Q8IYR6 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TMEFF1Q8IYR6 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
TMEFF1Q8IYR6 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TMEFF1Q8IYR6 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.46■□□□□ 0.06
TMEFF1Q8IYR6 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.45■□□□□ 0.06
TMEFF1Q8IYR6 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TMEFF1Q8IYR6 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TMEFF1Q8IYR6 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
TMEFF1Q8IYR6 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TMEFF1Q8IYR6 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TMEFF1Q8IYR6 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.45■□□□□ 0.06
TMEFF1Q8IYR6 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.45■□□□□ 0.06
TMEFF1Q8IYR6 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TMEFF1Q8IYR6 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
TMEFF1Q8IYR6 HARS-202ENST00000415192 1401 ntTSL 2 BASIC15.45■□□□□ 0.06
TMEFF1Q8IYR6 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.45■□□□□ 0.06
TMEFF1Q8IYR6 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.45■□□□□ 0.06
TMEFF1Q8IYR6 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.45■□□□□ 0.06
TMEFF1Q8IYR6 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TMEFF1Q8IYR6 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TMEFF1Q8IYR6 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TMEFF1Q8IYR6 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
TMEFF1Q8IYR6 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
TMEFF1Q8IYR6 ELK2AP-201ENST00000392510 1007 ntBASIC15.45■□□□□ 0.06
TMEFF1Q8IYR6 MPV17-205ENST00000402310 906 ntTSL 5 BASIC15.45■□□□□ 0.06
TMEFF1Q8IYR6 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
TMEFF1Q8IYR6 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC15.45■□□□□ 0.06
TMEFF1Q8IYR6 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC15.45■□□□□ 0.06
TMEFF1Q8IYR6 AKR7A2P1-201ENST00000460134 915 ntBASIC15.45■□□□□ 0.06
TMEFF1Q8IYR6 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TMEFF1Q8IYR6 RNA5SP423-201ENST00000517127 109 ntBASIC15.45■□□□□ 0.06
TMEFF1Q8IYR6 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TMEFF1Q8IYR6 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.45■□□□□ 0.06
TMEFF1Q8IYR6 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.45■□□□□ 0.06
TMEFF1Q8IYR6 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
TMEFF1Q8IYR6 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.45■□□□□ 0.06
TMEFF1Q8IYR6 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TMEFF1Q8IYR6 BX539320.1-201ENST00000623759 877 ntBASIC15.45■□□□□ 0.06
TMEFF1Q8IYR6 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
TMEFF1Q8IYR6 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.45■□□□□ 0.06
TMEFF1Q8IYR6 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC15.45■□□□□ 0.06
TMEFF1Q8IYR6 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
TMEFF1Q8IYR6 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TMEFF1Q8IYR6 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
TMEFF1Q8IYR6 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.45■□□□□ 0.06
TMEFF1Q8IYR6 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.45■□□□□ 0.06
TMEFF1Q8IYR6 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TMEFF1Q8IYR6 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TMEFF1Q8IYR6 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.45■□□□□ 0.06
TMEFF1Q8IYR6 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TMEFF1Q8IYR6 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TMEFF1Q8IYR6 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TMEFF1Q8IYR6 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TMEFF1Q8IYR6 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC15.44■□□□□ 0.06
TMEFF1Q8IYR6 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.44■□□□□ 0.06
TMEFF1Q8IYR6 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TMEFF1Q8IYR6 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TMEFF1Q8IYR6 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TMEFF1Q8IYR6 FOS-202ENST00000535987 1402 ntTSL 2 BASIC15.44■□□□□ 0.06
TMEFF1Q8IYR6 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TMEFF1Q8IYR6 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.44■□□□□ 0.06
TMEFF1Q8IYR6 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TMEFF1Q8IYR6 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
TMEFF1Q8IYR6 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
TMEFF1Q8IYR6 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TMEFF1Q8IYR6 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TMEFF1Q8IYR6 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms