Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
RTTNQ86VV8 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC13.88□□□□□ -0.19
RTTNQ86VV8 PAM16-215ENST00000577031 548 ntTSL 4 BASIC13.88□□□□□ -0.19
RTTNQ86VV8 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
RTTNQ86VV8 TEX28P1-201ENST00000613479 1221 ntBASIC13.88□□□□□ -0.19
RTTNQ86VV8 TEX28P2-201ENST00000617764 1221 ntBASIC13.88□□□□□ -0.19
RTTNQ86VV8 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RTTNQ86VV8 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RTTNQ86VV8 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
RTTNQ86VV8 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
RTTNQ86VV8 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
RTTNQ86VV8 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.88□□□□□ -0.19
RTTNQ86VV8 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.88□□□□□ -0.19
RTTNQ86VV8 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
RTTNQ86VV8 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
RTTNQ86VV8 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RTTNQ86VV8 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC13.88□□□□□ -0.19
RTTNQ86VV8 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.88□□□□□ -0.19
RTTNQ86VV8 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC13.87□□□□□ -0.19
RTTNQ86VV8 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RTTNQ86VV8 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RTTNQ86VV8 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RTTNQ86VV8 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RTTNQ86VV8 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC13.87□□□□□ -0.19
RTTNQ86VV8 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.87□□□□□ -0.19
RTTNQ86VV8 KRT17P7-201ENST00000451704 1104 ntBASIC13.87□□□□□ -0.19
RTTNQ86VV8 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC13.87□□□□□ -0.19
RTTNQ86VV8 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC13.87□□□□□ -0.19
RTTNQ86VV8 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC13.87□□□□□ -0.19
RTTNQ86VV8 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.87□□□□□ -0.19
RTTNQ86VV8 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RTTNQ86VV8 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.87□□□□□ -0.19
RTTNQ86VV8 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RTTNQ86VV8 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RTTNQ86VV8 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RTTNQ86VV8 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
RTTNQ86VV8 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RTTNQ86VV8 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RTTNQ86VV8 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RTTNQ86VV8 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RTTNQ86VV8 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
RTTNQ86VV8 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
RTTNQ86VV8 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
RTTNQ86VV8 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RTTNQ86VV8 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RTTNQ86VV8 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
RTTNQ86VV8 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
RTTNQ86VV8 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RTTNQ86VV8 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
RTTNQ86VV8 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RTTNQ86VV8 HIST3H2BA-201ENST00000436555 524 ntBASIC13.87□□□□□ -0.19
RTTNQ86VV8 PHKG1P2-201ENST00000457537 863 ntBASIC13.87□□□□□ -0.19
RTTNQ86VV8 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC13.87□□□□□ -0.19
RTTNQ86VV8 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RTTNQ86VV8 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
RTTNQ86VV8 AL512361.1-201ENST00000554200 418 ntBASIC13.87□□□□□ -0.19
RTTNQ86VV8 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RTTNQ86VV8 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC13.87□□□□□ -0.19
RTTNQ86VV8 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RTTNQ86VV8 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RTTNQ86VV8 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
RTTNQ86VV8 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
RTTNQ86VV8 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RTTNQ86VV8 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC13.87□□□□□ -0.19
RTTNQ86VV8 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC13.87□□□□□ -0.19
RTTNQ86VV8 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
RTTNQ86VV8 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RTTNQ86VV8 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RTTNQ86VV8 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RTTNQ86VV8 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
RTTNQ86VV8 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC13.86□□□□□ -0.19
RTTNQ86VV8 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RTTNQ86VV8 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RTTNQ86VV8 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RTTNQ86VV8 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.86□□□□□ -0.19
RTTNQ86VV8 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13.86□□□□□ -0.19
RTTNQ86VV8 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC13.86□□□□□ -0.19
RTTNQ86VV8 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.86□□□□□ -0.19
RTTNQ86VV8 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
RTTNQ86VV8 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC13.86□□□□□ -0.19
RTTNQ86VV8 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC13.86□□□□□ -0.19
RTTNQ86VV8 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RTTNQ86VV8 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.86□□□□□ -0.19
RTTNQ86VV8 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
RTTNQ86VV8 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.86□□□□□ -0.19
RTTNQ86VV8 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.86□□□□□ -0.19
RTTNQ86VV8 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RTTNQ86VV8 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
RTTNQ86VV8 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RTTNQ86VV8 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC13.86□□□□□ -0.19
RTTNQ86VV8 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
RTTNQ86VV8 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RTTNQ86VV8 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC13.86□□□□□ -0.19
RTTNQ86VV8 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
RTTNQ86VV8 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC13.86□□□□□ -0.19
RTTNQ86VV8 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.86□□□□□ -0.19
RTTNQ86VV8 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
RTTNQ86VV8 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RTTNQ86VV8 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
RTTNQ86VV8 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms