Protein–RNA interactions for Protein: Q7Z3J3

RGPD4, RanBP2-like and GRIP domain-containing protein 4, humanhuman

Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4Q7Z3J3 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
RGPD4Q7Z3J3 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RGPD4Q7Z3J3 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC19.14■□□□□ 0.65
RGPD4Q7Z3J3 MRPL37P1-201ENST00000592451 1337 ntBASIC19.14■□□□□ 0.65
RGPD4Q7Z3J3 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
RGPD4Q7Z3J3 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RGPD4Q7Z3J3 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC19.14■□□□□ 0.65
RGPD4Q7Z3J3 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RGPD4Q7Z3J3 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RGPD4Q7Z3J3 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RGPD4Q7Z3J3 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.14■□□□□ 0.65
RGPD4Q7Z3J3 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RGPD4Q7Z3J3 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RGPD4Q7Z3J3 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC19.14■□□□□ 0.65
RGPD4Q7Z3J3 BAK1P1-201ENST00000317045 636 ntBASIC19.14■□□□□ 0.65
RGPD4Q7Z3J3 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
RGPD4Q7Z3J3 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC19.14■□□□□ 0.65
RGPD4Q7Z3J3 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC19.14■□□□□ 0.65
RGPD4Q7Z3J3 RPS23-204ENST00000507980 836 ntTSL 2 BASIC19.14■□□□□ 0.65
RGPD4Q7Z3J3 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC19.14■□□□□ 0.65
RGPD4Q7Z3J3 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC19.14■□□□□ 0.65
RGPD4Q7Z3J3 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC19.14■□□□□ 0.65
RGPD4Q7Z3J3 SIGLEC18P-201ENST00000602271 909 ntBASIC19.14■□□□□ 0.65
RGPD4Q7Z3J3 AL022334.2-201ENST00000610000 484 ntBASIC19.14■□□□□ 0.65
RGPD4Q7Z3J3 MME-218ENST00000625667 363 ntTSL 5 BASIC19.14■□□□□ 0.65
RGPD4Q7Z3J3 DDX5-235ENST00000630471 473 ntTSL 4 BASIC19.14■□□□□ 0.65
RGPD4Q7Z3J3 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC19.14■□□□□ 0.65
RGPD4Q7Z3J3 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RGPD4Q7Z3J3 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
RGPD4Q7Z3J3 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RGPD4Q7Z3J3 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
RGPD4Q7Z3J3 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RGPD4Q7Z3J3 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC19.13■□□□□ 0.65
RGPD4Q7Z3J3 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RGPD4Q7Z3J3 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RGPD4Q7Z3J3 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC19.13■□□□□ 0.65
RGPD4Q7Z3J3 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC19.13■□□□□ 0.65
RGPD4Q7Z3J3 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RGPD4Q7Z3J3 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
RGPD4Q7Z3J3 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RGPD4Q7Z3J3 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RGPD4Q7Z3J3 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.13■□□□□ 0.65
RGPD4Q7Z3J3 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
RGPD4Q7Z3J3 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RGPD4Q7Z3J3 KRT17P4-201ENST00000429445 819 ntBASIC19.13■□□□□ 0.65
RGPD4Q7Z3J3 FAM86KP-201ENST00000509817 987 ntBASIC19.13■□□□□ 0.65
RGPD4Q7Z3J3 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC19.13■□□□□ 0.65
RGPD4Q7Z3J3 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RGPD4Q7Z3J3 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
RGPD4Q7Z3J3 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
RGPD4Q7Z3J3 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
RGPD4Q7Z3J3 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RGPD4Q7Z3J3 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
RGPD4Q7Z3J3 UROS-201ENST00000368774 744 ntTSL 2 BASIC19.12■□□□□ 0.65
RGPD4Q7Z3J3 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RGPD4Q7Z3J3 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC19.12■□□□□ 0.65
RGPD4Q7Z3J3 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC19.12■□□□□ 0.65
RGPD4Q7Z3J3 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC19.12■□□□□ 0.65
RGPD4Q7Z3J3 AC026434.2-201ENST00000506094 1078 ntBASIC19.12■□□□□ 0.65
RGPD4Q7Z3J3 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC19.12■□□□□ 0.65
RGPD4Q7Z3J3 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RGPD4Q7Z3J3 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
RGPD4Q7Z3J3 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC19.12■□□□□ 0.65
RGPD4Q7Z3J3 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
RGPD4Q7Z3J3 AL645608.8-201ENST00000606034 2086 ntBASIC19.12■□□□□ 0.65
RGPD4Q7Z3J3 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
RGPD4Q7Z3J3 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RGPD4Q7Z3J3 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RGPD4Q7Z3J3 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
RGPD4Q7Z3J3 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RGPD4Q7Z3J3 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
RGPD4Q7Z3J3 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RGPD4Q7Z3J3 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RGPD4Q7Z3J3 USP4-203ENST00000415188 1454 ntTSL 3 BASIC19.12■□□□□ 0.65
RGPD4Q7Z3J3 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RGPD4Q7Z3J3 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
RGPD4Q7Z3J3 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RGPD4Q7Z3J3 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RGPD4Q7Z3J3 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RGPD4Q7Z3J3 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RGPD4Q7Z3J3 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
RGPD4Q7Z3J3 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RGPD4Q7Z3J3 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RGPD4Q7Z3J3 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC19.11■□□□□ 0.65
RGPD4Q7Z3J3 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
RGPD4Q7Z3J3 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC19.11■□□□□ 0.65
RGPD4Q7Z3J3 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
RGPD4Q7Z3J3 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.11■□□□□ 0.65
RGPD4Q7Z3J3 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC19.11■□□□□ 0.65
RGPD4Q7Z3J3 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
RGPD4Q7Z3J3 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
RGPD4Q7Z3J3 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC19.11■□□□□ 0.65
RGPD4Q7Z3J3 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
RGPD4Q7Z3J3 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC19.11■□□□□ 0.65
RGPD4Q7Z3J3 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RGPD4Q7Z3J3 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RGPD4Q7Z3J3 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RGPD4Q7Z3J3 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
RGPD4Q7Z3J3 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RGPD4Q7Z3J3 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms