Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
FAM78BQ5VT40 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
FAM78BQ5VT40 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
FAM78BQ5VT40 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
FAM78BQ5VT40 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
FAM78BQ5VT40 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
FAM78BQ5VT40 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
FAM78BQ5VT40 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
FAM78BQ5VT40 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
FAM78BQ5VT40 AC134407.2-201ENST00000625089 1978 ntBASIC12.51□□□□□ -0.41
FAM78BQ5VT40 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
FAM78BQ5VT40 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
FAM78BQ5VT40 AGAP7P-201ENST00000582299 2062 ntBASIC12.51□□□□□ -0.41
FAM78BQ5VT40 AGAP14-201ENST00000624701 2060 ntBASIC12.51□□□□□ -0.41
FAM78BQ5VT40 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
FAM78BQ5VT40 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
FAM78BQ5VT40 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
FAM78BQ5VT40 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC12.51□□□□□ -0.41
FAM78BQ5VT40 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
FAM78BQ5VT40 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC12.51□□□□□ -0.41
FAM78BQ5VT40 MRPL20P1-201ENST00000400819 433 ntBASIC12.51□□□□□ -0.41
FAM78BQ5VT40 HMGA1P7-201ENST00000406908 502 ntBASIC12.51□□□□□ -0.41
FAM78BQ5VT40 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
FAM78BQ5VT40 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
FAM78BQ5VT40 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC12.51□□□□□ -0.41
FAM78BQ5VT40 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC12.51□□□□□ -0.41
FAM78BQ5VT40 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC12.51□□□□□ -0.41
FAM78BQ5VT40 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC12.51□□□□□ -0.41
FAM78BQ5VT40 RIN3-211ENST00000557762 517 ntTSL 3 BASIC12.51□□□□□ -0.41
FAM78BQ5VT40 AC012640.2-201ENST00000561606 901 ntBASIC12.51□□□□□ -0.41
FAM78BQ5VT40 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC12.51□□□□□ -0.41
FAM78BQ5VT40 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
FAM78BQ5VT40 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC12.51□□□□□ -0.41
FAM78BQ5VT40 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC12.51□□□□□ -0.41
FAM78BQ5VT40 AL773604.1-201ENST00000617417 272 ntBASIC12.51□□□□□ -0.41
FAM78BQ5VT40 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
FAM78BQ5VT40 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
FAM78BQ5VT40 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC12.51□□□□□ -0.41
FAM78BQ5VT40 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
FAM78BQ5VT40 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
FAM78BQ5VT40 ABR-228ENST00000574437 3196 ntTSL 5 BASIC12.51□□□□□ -0.41
FAM78BQ5VT40 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
FAM78BQ5VT40 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC12.51□□□□□ -0.41
FAM78BQ5VT40 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
FAM78BQ5VT40 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC12.51□□□□□ -0.41
FAM78BQ5VT40 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC12.51□□□□□ -0.41
FAM78BQ5VT40 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
FAM78BQ5VT40 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
FAM78BQ5VT40 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC12.51□□□□□ -0.41
FAM78BQ5VT40 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
FAM78BQ5VT40 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC12.51□□□□□ -0.41
FAM78BQ5VT40 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC12.51□□□□□ -0.41
FAM78BQ5VT40 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
FAM78BQ5VT40 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
FAM78BQ5VT40 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC12.51□□□□□ -0.41
FAM78BQ5VT40 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
FAM78BQ5VT40 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC12.51□□□□□ -0.41
FAM78BQ5VT40 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
FAM78BQ5VT40 GPI-205ENST00000586425 1799 ntTSL 5 BASIC12.51□□□□□ -0.41
FAM78BQ5VT40 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
FAM78BQ5VT40 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
FAM78BQ5VT40 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
FAM78BQ5VT40 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC12.5□□□□□ -0.41
FAM78BQ5VT40 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
FAM78BQ5VT40 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
FAM78BQ5VT40 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
FAM78BQ5VT40 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
FAM78BQ5VT40 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
FAM78BQ5VT40 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
FAM78BQ5VT40 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC12.5□□□□□ -0.41
FAM78BQ5VT40 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
FAM78BQ5VT40 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
FAM78BQ5VT40 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
FAM78BQ5VT40 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
FAM78BQ5VT40 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
FAM78BQ5VT40 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
FAM78BQ5VT40 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
FAM78BQ5VT40 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
FAM78BQ5VT40 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
FAM78BQ5VT40 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
FAM78BQ5VT40 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
FAM78BQ5VT40 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
FAM78BQ5VT40 CENPM-204ENST00000402420 688 ntTSL 5 BASIC12.5□□□□□ -0.41
FAM78BQ5VT40 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC12.5□□□□□ -0.41
FAM78BQ5VT40 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC12.5□□□□□ -0.41
FAM78BQ5VT40 IGHV3-65-201ENST00000523210 341 ntBASIC12.5□□□□□ -0.41
FAM78BQ5VT40 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC12.5□□□□□ -0.41
FAM78BQ5VT40 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC12.5□□□□□ -0.41
FAM78BQ5VT40 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC12.5□□□□□ -0.41
FAM78BQ5VT40 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC12.5□□□□□ -0.41
FAM78BQ5VT40 FAM215A-202ENST00000632077 792 ntBASIC12.5□□□□□ -0.41
FAM78BQ5VT40 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
FAM78BQ5VT40 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
FAM78BQ5VT40 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC12.5□□□□□ -0.41
FAM78BQ5VT40 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
FAM78BQ5VT40 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
FAM78BQ5VT40 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC12.5□□□□□ -0.41
FAM78BQ5VT40 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
FAM78BQ5VT40 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC12.5□□□□□ -0.41
FAM78BQ5VT40 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms