Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ATPAF1Q5TC12 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC13.66□□□□□ -0.22
ATPAF1Q5TC12 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC13.66□□□□□ -0.22
ATPAF1Q5TC12 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ATPAF1Q5TC12 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ATPAF1Q5TC12 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ATPAF1Q5TC12 GRK6P1-201ENST00000400595 1711 ntBASIC13.66□□□□□ -0.22
ATPAF1Q5TC12 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
ATPAF1Q5TC12 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
ATPAF1Q5TC12 PCDHA3-202ENST00000532566 4594 ntBASIC13.66□□□□□ -0.22
ATPAF1Q5TC12 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
ATPAF1Q5TC12 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.66□□□□□ -0.22
ATPAF1Q5TC12 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.66□□□□□ -0.22
ATPAF1Q5TC12 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ATPAF1Q5TC12 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
ATPAF1Q5TC12 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ATPAF1Q5TC12 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ATPAF1Q5TC12 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ATPAF1Q5TC12 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ATPAF1Q5TC12 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.66□□□□□ -0.22
ATPAF1Q5TC12 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ATPAF1Q5TC12 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.65□□□□□ -0.22
ATPAF1Q5TC12 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ATPAF1Q5TC12 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
ATPAF1Q5TC12 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.65□□□□□ -0.22
ATPAF1Q5TC12 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ATPAF1Q5TC12 AC104581.4-201ENST00000623126 3052 ntBASIC13.65□□□□□ -0.22
ATPAF1Q5TC12 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.65□□□□□ -0.22
ATPAF1Q5TC12 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ATPAF1Q5TC12 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ATPAF1Q5TC12 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
ATPAF1Q5TC12 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
ATPAF1Q5TC12 FOXO1B-201ENST00000504678 1527 ntBASIC13.65□□□□□ -0.22
ATPAF1Q5TC12 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
ATPAF1Q5TC12 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ATPAF1Q5TC12 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
ATPAF1Q5TC12 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.65□□□□□ -0.22
ATPAF1Q5TC12 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.65□□□□□ -0.22
ATPAF1Q5TC12 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ATPAF1Q5TC12 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.65□□□□□ -0.22
ATPAF1Q5TC12 AC139749.1-202ENST00000617529 3139 ntBASIC13.65□□□□□ -0.22
ATPAF1Q5TC12 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ATPAF1Q5TC12 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ATPAF1Q5TC12 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
ATPAF1Q5TC12 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ATPAF1Q5TC12 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.65□□□□□ -0.22
ATPAF1Q5TC12 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ATPAF1Q5TC12 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ATPAF1Q5TC12 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ATPAF1Q5TC12 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ATPAF1Q5TC12 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ATPAF1Q5TC12 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ATPAF1Q5TC12 FAM220BP-201ENST00000377689 816 ntBASIC13.65□□□□□ -0.22
ATPAF1Q5TC12 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ATPAF1Q5TC12 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
ATPAF1Q5TC12 AL627223.1-201ENST00000416693 442 ntBASIC13.65□□□□□ -0.22
ATPAF1Q5TC12 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC13.65□□□□□ -0.22
ATPAF1Q5TC12 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ATPAF1Q5TC12 CNN2P11-201ENST00000429351 262 ntBASIC13.65□□□□□ -0.22
ATPAF1Q5TC12 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC13.65□□□□□ -0.22
ATPAF1Q5TC12 AC005237.2-201ENST00000434368 219 ntBASIC13.65□□□□□ -0.22
ATPAF1Q5TC12 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
ATPAF1Q5TC12 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC13.65□□□□□ -0.22
ATPAF1Q5TC12 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.65□□□□□ -0.22
ATPAF1Q5TC12 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
ATPAF1Q5TC12 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
ATPAF1Q5TC12 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC13.65□□□□□ -0.22
ATPAF1Q5TC12 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
ATPAF1Q5TC12 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.65□□□□□ -0.22
ATPAF1Q5TC12 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
ATPAF1Q5TC12 AL122018.1-201ENST00000446607 2310 ntBASIC13.65□□□□□ -0.22
ATPAF1Q5TC12 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ATPAF1Q5TC12 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
ATPAF1Q5TC12 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
ATPAF1Q5TC12 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC13.65□□□□□ -0.22
ATPAF1Q5TC12 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ATPAF1Q5TC12 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ATPAF1Q5TC12 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.65□□□□□ -0.22
ATPAF1Q5TC12 AC105250.1-201ENST00000509378 2057 ntBASIC13.65□□□□□ -0.22
ATPAF1Q5TC12 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ATPAF1Q5TC12 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
ATPAF1Q5TC12 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ATPAF1Q5TC12 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ATPAF1Q5TC12 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.65□□□□□ -0.22
ATPAF1Q5TC12 LINC00552-201ENST00000625151 2579 ntBASIC13.65□□□□□ -0.22
ATPAF1Q5TC12 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.65□□□□□ -0.22
ATPAF1Q5TC12 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
ATPAF1Q5TC12 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
ATPAF1Q5TC12 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ATPAF1Q5TC12 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC13.64□□□□□ -0.23
ATPAF1Q5TC12 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ATPAF1Q5TC12 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.64□□□□□ -0.23
ATPAF1Q5TC12 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.64□□□□□ -0.23
ATPAF1Q5TC12 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ATPAF1Q5TC12 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
ATPAF1Q5TC12 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.64□□□□□ -0.23
ATPAF1Q5TC12 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
ATPAF1Q5TC12 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.64□□□□□ -0.23
ATPAF1Q5TC12 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ATPAF1Q5TC12 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms