Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC58Q4VC31 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC58Q4VC31 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC58Q4VC31 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC58Q4VC31 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.07□□□□□ -0.16
CCDC58Q4VC31 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC58Q4VC31 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC58Q4VC31 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC58Q4VC31 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
CCDC58Q4VC31 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC58Q4VC31 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.07□□□□□ -0.16
CCDC58Q4VC31 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CCDC58Q4VC31 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC58Q4VC31 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.07□□□□□ -0.16
CCDC58Q4VC31 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.07□□□□□ -0.16
CCDC58Q4VC31 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.07□□□□□ -0.16
CCDC58Q4VC31 AL645939.2-201ENST00000427340 991 ntBASIC14.07□□□□□ -0.16
CCDC58Q4VC31 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC14.07□□□□□ -0.16
CCDC58Q4VC31 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC14.07□□□□□ -0.16
CCDC58Q4VC31 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC14.07□□□□□ -0.16
CCDC58Q4VC31 AF186996.4-201ENST00000467186 377 ntBASIC14.07□□□□□ -0.16
CCDC58Q4VC31 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC58Q4VC31 PRYP6-201ENST00000514804 343 ntBASIC14.07□□□□□ -0.16
CCDC58Q4VC31 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC14.07□□□□□ -0.16
CCDC58Q4VC31 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC14.07□□□□□ -0.16
CCDC58Q4VC31 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC14.07□□□□□ -0.16
CCDC58Q4VC31 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.07□□□□□ -0.16
CCDC58Q4VC31 AC117500.6-201ENST00000624871 588 ntBASIC14.07□□□□□ -0.16
CCDC58Q4VC31 MROH4P-201ENST00000431302 1578 ntBASIC14.07□□□□□ -0.16
CCDC58Q4VC31 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC58Q4VC31 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC58Q4VC31 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CCDC58Q4VC31 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC58Q4VC31 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC58Q4VC31 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC58Q4VC31 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CCDC58Q4VC31 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC58Q4VC31 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.07□□□□□ -0.16
CCDC58Q4VC31 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC58Q4VC31 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC58Q4VC31 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.07□□□□□ -0.16
CCDC58Q4VC31 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC58Q4VC31 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC58Q4VC31 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC58Q4VC31 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC58Q4VC31 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC58Q4VC31 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.07□□□□□ -0.16
CCDC58Q4VC31 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC58Q4VC31 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.06□□□□□ -0.16
CCDC58Q4VC31 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC58Q4VC31 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC58Q4VC31 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC58Q4VC31 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC58Q4VC31 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC58Q4VC31 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC58Q4VC31 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC58Q4VC31 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC58Q4VC31 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC58Q4VC31 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC58Q4VC31 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC58Q4VC31 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.06□□□□□ -0.16
CCDC58Q4VC31 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC58Q4VC31 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.06□□□□□ -0.16
CCDC58Q4VC31 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.06□□□□□ -0.16
CCDC58Q4VC31 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC58Q4VC31 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC58Q4VC31 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CCDC58Q4VC31 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC14.06□□□□□ -0.16
CCDC58Q4VC31 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC58Q4VC31 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC58Q4VC31 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CCDC58Q4VC31 CENPM-204ENST00000402420 688 ntTSL 5 BASIC14.06□□□□□ -0.16
CCDC58Q4VC31 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.06□□□□□ -0.16
CCDC58Q4VC31 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.06□□□□□ -0.16
CCDC58Q4VC31 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.06□□□□□ -0.16
CCDC58Q4VC31 UPK3BP1-201ENST00000428678 509 ntBASIC14.06□□□□□ -0.16
CCDC58Q4VC31 HNRNPDP1-201ENST00000439535 754 ntBASIC14.06□□□□□ -0.16
CCDC58Q4VC31 VN2R19P-201ENST00000442399 1052 ntBASIC14.06□□□□□ -0.16
CCDC58Q4VC31 AC108751.1-201ENST00000490852 363 ntBASIC14.06□□□□□ -0.16
CCDC58Q4VC31 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC14.06□□□□□ -0.16
CCDC58Q4VC31 TOLLIP-AS1-201ENST00000530897 939 ntBASIC14.06□□□□□ -0.16
CCDC58Q4VC31 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.06□□□□□ -0.16
CCDC58Q4VC31 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.06□□□□□ -0.16
CCDC58Q4VC31 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.06□□□□□ -0.16
CCDC58Q4VC31 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC58Q4VC31 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC58Q4VC31 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC58Q4VC31 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC58Q4VC31 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC58Q4VC31 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC58Q4VC31 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
CCDC58Q4VC31 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC58Q4VC31 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC58Q4VC31 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC58Q4VC31 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.06□□□□□ -0.16
CCDC58Q4VC31 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC58Q4VC31 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC58Q4VC31 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCDC58Q4VC31 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.06□□□□□ -0.16
CCDC58Q4VC31 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms