Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM71Q2Q1W2 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC16.9■□□□□ 0.3
TRIM71Q2Q1W2 AL023775.1-201ENST00000454907 1746 ntBASIC16.9■□□□□ 0.3
TRIM71Q2Q1W2 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.9■□□□□ 0.3
TRIM71Q2Q1W2 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRIM71Q2Q1W2 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
TRIM71Q2Q1W2 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TRIM71Q2Q1W2 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
TRIM71Q2Q1W2 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM71Q2Q1W2 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.89■□□□□ 0.29
TRIM71Q2Q1W2 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM71Q2Q1W2 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM71Q2Q1W2 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.89■□□□□ 0.29
TRIM71Q2Q1W2 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM71Q2Q1W2 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM71Q2Q1W2 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM71Q2Q1W2 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
TRIM71Q2Q1W2 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC16.89■□□□□ 0.29
TRIM71Q2Q1W2 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC16.89■□□□□ 0.29
TRIM71Q2Q1W2 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC16.89■□□□□ 0.29
TRIM71Q2Q1W2 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.89■□□□□ 0.29
TRIM71Q2Q1W2 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC16.89■□□□□ 0.29
TRIM71Q2Q1W2 HIST2H2BC-201ENST00000498492 580 ntBASIC16.89■□□□□ 0.29
TRIM71Q2Q1W2 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC16.89■□□□□ 0.29
TRIM71Q2Q1W2 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
TRIM71Q2Q1W2 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM71Q2Q1W2 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC16.89■□□□□ 0.29
TRIM71Q2Q1W2 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC16.89■□□□□ 0.29
TRIM71Q2Q1W2 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC16.89■□□□□ 0.29
TRIM71Q2Q1W2 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.89■□□□□ 0.29
TRIM71Q2Q1W2 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC16.89■□□□□ 0.29
TRIM71Q2Q1W2 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.89■□□□□ 0.29
TRIM71Q2Q1W2 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM71Q2Q1W2 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC16.89■□□□□ 0.29
TRIM71Q2Q1W2 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
TRIM71Q2Q1W2 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM71Q2Q1W2 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.89■□□□□ 0.29
TRIM71Q2Q1W2 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM71Q2Q1W2 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM71Q2Q1W2 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.89■□□□□ 0.29
TRIM71Q2Q1W2 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM71Q2Q1W2 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM71Q2Q1W2 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM71Q2Q1W2 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
TRIM71Q2Q1W2 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM71Q2Q1W2 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM71Q2Q1W2 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.88■□□□□ 0.29
TRIM71Q2Q1W2 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM71Q2Q1W2 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.88■□□□□ 0.29
TRIM71Q2Q1W2 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TRIM71Q2Q1W2 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TRIM71Q2Q1W2 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM71Q2Q1W2 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM71Q2Q1W2 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.88■□□□□ 0.29
TRIM71Q2Q1W2 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM71Q2Q1W2 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
TRIM71Q2Q1W2 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM71Q2Q1W2 AL645937.2-201ENST00000396808 931 ntBASIC16.88■□□□□ 0.29
TRIM71Q2Q1W2 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.88■□□□□ 0.29
TRIM71Q2Q1W2 FNTAP2-201ENST00000430308 634 ntBASIC16.88■□□□□ 0.29
TRIM71Q2Q1W2 EIF3FP3-201ENST00000434851 1086 ntBASIC16.88■□□□□ 0.29
TRIM71Q2Q1W2 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC16.88■□□□□ 0.29
TRIM71Q2Q1W2 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC16.88■□□□□ 0.29
TRIM71Q2Q1W2 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC16.88■□□□□ 0.29
TRIM71Q2Q1W2 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.88■□□□□ 0.29
TRIM71Q2Q1W2 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM71Q2Q1W2 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TRIM71Q2Q1W2 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC16.88■□□□□ 0.29
TRIM71Q2Q1W2 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM71Q2Q1W2 AC106872.11-201ENST00000605838 421 ntBASIC16.88■□□□□ 0.29
TRIM71Q2Q1W2 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM71Q2Q1W2 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM71Q2Q1W2 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.88■□□□□ 0.29
TRIM71Q2Q1W2 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.88■□□□□ 0.29
TRIM71Q2Q1W2 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.88■□□□□ 0.29
TRIM71Q2Q1W2 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM71Q2Q1W2 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.88■□□□□ 0.29
TRIM71Q2Q1W2 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM71Q2Q1W2 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM71Q2Q1W2 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM71Q2Q1W2 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM71Q2Q1W2 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
TRIM71Q2Q1W2 KRT8P14-201ENST00000414254 1442 ntBASIC16.87■□□□□ 0.29
TRIM71Q2Q1W2 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
TRIM71Q2Q1W2 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TRIM71Q2Q1W2 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
TRIM71Q2Q1W2 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM71Q2Q1W2 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.87■□□□□ 0.29
TRIM71Q2Q1W2 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.87■□□□□ 0.29
TRIM71Q2Q1W2 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM71Q2Q1W2 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM71Q2Q1W2 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM71Q2Q1W2 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
TRIM71Q2Q1W2 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM71Q2Q1W2 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
TRIM71Q2Q1W2 HNRNPA1P32-201ENST00000396326 963 ntBASIC16.87■□□□□ 0.29
TRIM71Q2Q1W2 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC16.87■□□□□ 0.29
TRIM71Q2Q1W2 POM121L10P-201ENST00000436994 1285 ntBASIC16.87■□□□□ 0.29
TRIM71Q2Q1W2 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC16.87■□□□□ 0.29
TRIM71Q2Q1W2 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms