Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.69■□□□□ 0.26
CTC1Q2NKJ3 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.69■□□□□ 0.26
CTC1Q2NKJ3 LARP4-220ENST00000615080 856 ntTSL 5 BASIC16.69■□□□□ 0.26
CTC1Q2NKJ3 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CTC1Q2NKJ3 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CTC1Q2NKJ3 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.69■□□□□ 0.26
CTC1Q2NKJ3 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CTC1Q2NKJ3 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.69■□□□□ 0.26
CTC1Q2NKJ3 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CTC1Q2NKJ3 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CTC1Q2NKJ3 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.69■□□□□ 0.26
CTC1Q2NKJ3 PCGF3-213ENST00000620529 1899 ntBASIC16.69■□□□□ 0.26
CTC1Q2NKJ3 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.69■□□□□ 0.26
CTC1Q2NKJ3 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CTC1Q2NKJ3 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CTC1Q2NKJ3 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CTC1Q2NKJ3 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CTC1Q2NKJ3 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CTC1Q2NKJ3 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CTC1Q2NKJ3 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CTC1Q2NKJ3 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CTC1Q2NKJ3 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CTC1Q2NKJ3 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.68■□□□□ 0.26
CTC1Q2NKJ3 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CTC1Q2NKJ3 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CTC1Q2NKJ3 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CTC1Q2NKJ3 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CTC1Q2NKJ3 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CTC1Q2NKJ3 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CTC1Q2NKJ3 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.68■□□□□ 0.26
CTC1Q2NKJ3 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CTC1Q2NKJ3 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
CTC1Q2NKJ3 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CTC1Q2NKJ3 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CTC1Q2NKJ3 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
CTC1Q2NKJ3 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.68■□□□□ 0.26
CTC1Q2NKJ3 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CTC1Q2NKJ3 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CTC1Q2NKJ3 AC104306.2-201ENST00000451877 341 ntBASIC16.68■□□□□ 0.26
CTC1Q2NKJ3 AKR7A2P1-201ENST00000460134 915 ntBASIC16.68■□□□□ 0.26
CTC1Q2NKJ3 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC16.68■□□□□ 0.26
CTC1Q2NKJ3 VDAC1P7-201ENST00000462417 847 ntBASIC16.68■□□□□ 0.26
CTC1Q2NKJ3 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC16.68■□□□□ 0.26
CTC1Q2NKJ3 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
CTC1Q2NKJ3 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CTC1Q2NKJ3 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC16.68■□□□□ 0.26
CTC1Q2NKJ3 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CTC1Q2NKJ3 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CTC1Q2NKJ3 PRKN-211ENST00000615065 261 ntTSL 5 BASIC16.68■□□□□ 0.26
CTC1Q2NKJ3 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.68■□□□□ 0.26
CTC1Q2NKJ3 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CTC1Q2NKJ3 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CTC1Q2NKJ3 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CTC1Q2NKJ3 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
CTC1Q2NKJ3 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
CTC1Q2NKJ3 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CTC1Q2NKJ3 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CTC1Q2NKJ3 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CTC1Q2NKJ3 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.68■□□□□ 0.26
CTC1Q2NKJ3 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.68■□□□□ 0.26
CTC1Q2NKJ3 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CTC1Q2NKJ3 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CTC1Q2NKJ3 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CTC1Q2NKJ3 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CTC1Q2NKJ3 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CTC1Q2NKJ3 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.67■□□□□ 0.26
CTC1Q2NKJ3 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.67■□□□□ 0.26
CTC1Q2NKJ3 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
CTC1Q2NKJ3 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CTC1Q2NKJ3 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CTC1Q2NKJ3 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CTC1Q2NKJ3 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CTC1Q2NKJ3 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CTC1Q2NKJ3 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CTC1Q2NKJ3 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.67■□□□□ 0.26
CTC1Q2NKJ3 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CTC1Q2NKJ3 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CTC1Q2NKJ3 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CTC1Q2NKJ3 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CTC1Q2NKJ3 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CTC1Q2NKJ3 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CTC1Q2NKJ3 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CTC1Q2NKJ3 ACKR1-201ENST00000368121 1240 ntBASIC16.67■□□□□ 0.26
CTC1Q2NKJ3 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC16.67■□□□□ 0.26
CTC1Q2NKJ3 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CTC1Q2NKJ3 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC16.67■□□□□ 0.26
CTC1Q2NKJ3 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.67■□□□□ 0.26
CTC1Q2NKJ3 PFN2-215ENST00000497148 743 ntTSL 4 BASIC16.67■□□□□ 0.26
CTC1Q2NKJ3 AC079328.1-201ENST00000560358 952 ntBASIC16.67■□□□□ 0.26
CTC1Q2NKJ3 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.67■□□□□ 0.26
CTC1Q2NKJ3 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.67■□□□□ 0.26
CTC1Q2NKJ3 KLK3-211ENST00000597483 810 ntTSL 2 BASIC16.67■□□□□ 0.26
CTC1Q2NKJ3 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC16.67■□□□□ 0.26
CTC1Q2NKJ3 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CTC1Q2NKJ3 AL008638.5-201ENST00000623814 1298 ntBASIC16.67■□□□□ 0.26
CTC1Q2NKJ3 AC015967.2-201ENST00000624092 234 ntBASIC16.67■□□□□ 0.26
CTC1Q2NKJ3 AC006435.4-201ENST00000625037 234 ntBASIC16.67■□□□□ 0.26
CTC1Q2NKJ3 AL356737.1-201ENST00000634391 234 ntBASIC16.67■□□□□ 0.26
CTC1Q2NKJ3 AC244452.3-201ENST00000636814 210 ntBASIC16.67■□□□□ 0.26
CTC1Q2NKJ3 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms