Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.46■□□□□ 0.23
USP46P62068 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC16.46■□□□□ 0.23
USP46P62068 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.46■□□□□ 0.23
USP46P62068 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.46■□□□□ 0.23
USP46P62068 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.46■□□□□ 0.23
USP46P62068 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
USP46P62068 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
USP46P62068 PAUPAR-201ENST00000630360 2965 ntBASIC16.46■□□□□ 0.23
USP46P62068 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
USP46P62068 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.46■□□□□ 0.23
USP46P62068 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
USP46P62068 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.46■□□□□ 0.22
USP46P62068 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
USP46P62068 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
USP46P62068 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.46■□□□□ 0.22
USP46P62068 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
USP46P62068 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
USP46P62068 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
USP46P62068 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
USP46P62068 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
USP46P62068 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.45■□□□□ 0.22
USP46P62068 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
USP46P62068 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
USP46P62068 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
USP46P62068 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.45■□□□□ 0.22
USP46P62068 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.45■□□□□ 0.22
USP46P62068 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.45■□□□□ 0.22
USP46P62068 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
USP46P62068 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
USP46P62068 OR8S1-201ENST00000310194 1080 ntBASIC16.45■□□□□ 0.22
USP46P62068 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
USP46P62068 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
USP46P62068 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
USP46P62068 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.45■□□□□ 0.22
USP46P62068 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.45■□□□□ 0.22
USP46P62068 KRT18P43-201ENST00000469825 1281 ntBASIC16.45■□□□□ 0.22
USP46P62068 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.45■□□□□ 0.22
USP46P62068 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC16.45■□□□□ 0.22
USP46P62068 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.45■□□□□ 0.22
USP46P62068 AL049840.4-201ENST00000602422 811 ntBASIC16.45■□□□□ 0.22
USP46P62068 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.45■□□□□ 0.22
USP46P62068 AC000095.1-201ENST00000603208 874 ntBASIC16.45■□□□□ 0.22
USP46P62068 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
USP46P62068 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
USP46P62068 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
USP46P62068 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
USP46P62068 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
USP46P62068 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.45■□□□□ 0.22
USP46P62068 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.45■□□□□ 0.22
USP46P62068 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.45■□□□□ 0.22
USP46P62068 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
USP46P62068 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
USP46P62068 AC099063.4-201ENST00000641099 1602 ntBASIC16.45■□□□□ 0.22
USP46P62068 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
USP46P62068 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
USP46P62068 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
USP46P62068 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
USP46P62068 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
USP46P62068 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
USP46P62068 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
USP46P62068 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.44■□□□□ 0.22
USP46P62068 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
USP46P62068 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
USP46P62068 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
USP46P62068 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
USP46P62068 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
USP46P62068 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.44■□□□□ 0.22
USP46P62068 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
USP46P62068 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
USP46P62068 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16.44■□□□□ 0.22
USP46P62068 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
USP46P62068 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
USP46P62068 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC16.44■□□□□ 0.22
USP46P62068 VDAC1P7-201ENST00000462417 847 ntBASIC16.44■□□□□ 0.22
USP46P62068 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.44■□□□□ 0.22
USP46P62068 AC124283.3-201ENST00000570869 594 ntBASIC16.44■□□□□ 0.22
USP46P62068 AC010319.3-201ENST00000597028 470 ntBASIC16.44■□□□□ 0.22
USP46P62068 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
USP46P62068 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC16.44■□□□□ 0.22
USP46P62068 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
USP46P62068 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
USP46P62068 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.44■□□□□ 0.22
USP46P62068 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
USP46P62068 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.44■□□□□ 0.22
USP46P62068 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
USP46P62068 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
USP46P62068 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
USP46P62068 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.43■□□□□ 0.22
USP46P62068 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
USP46P62068 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
USP46P62068 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
USP46P62068 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
USP46P62068 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
USP46P62068 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
USP46P62068 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
USP46P62068 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.43■□□□□ 0.22
USP46P62068 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
USP46P62068 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
USP46P62068 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
USP46P62068 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms