Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC12.82□□□□□ -0.36
SPCS3P61009 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SPCS3P61009 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SPCS3P61009 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SPCS3P61009 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SPCS3P61009 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
SPCS3P61009 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
SPCS3P61009 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
SPCS3P61009 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC12.82□□□□□ -0.36
SPCS3P61009 POR-201ENST00000394893 2532 ntTSL 5 BASIC12.82□□□□□ -0.36
SPCS3P61009 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SPCS3P61009 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
SPCS3P61009 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
SPCS3P61009 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SPCS3P61009 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SPCS3P61009 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SPCS3P61009 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC12.82□□□□□ -0.36
SPCS3P61009 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC12.82□□□□□ -0.36
SPCS3P61009 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC12.82□□□□□ -0.36
SPCS3P61009 AC098859.1-201ENST00000502915 1238 ntBASIC12.82□□□□□ -0.36
SPCS3P61009 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SPCS3P61009 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC12.82□□□□□ -0.36
SPCS3P61009 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC12.82□□□□□ -0.36
SPCS3P61009 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC12.82□□□□□ -0.36
SPCS3P61009 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC12.82□□□□□ -0.36
SPCS3P61009 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC12.82□□□□□ -0.36
SPCS3P61009 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC12.82□□□□□ -0.36
SPCS3P61009 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SPCS3P61009 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC12.82□□□□□ -0.36
SPCS3P61009 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SPCS3P61009 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SPCS3P61009 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
SPCS3P61009 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SPCS3P61009 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
SPCS3P61009 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SPCS3P61009 DGCR9-201ENST00000609630 2415 ntBASIC12.82□□□□□ -0.36
SPCS3P61009 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
SPCS3P61009 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SPCS3P61009 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SPCS3P61009 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC12.82□□□□□ -0.36
SPCS3P61009 POM121L4P-202ENST00000427789 1891 ntBASIC12.82□□□□□ -0.36
SPCS3P61009 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SPCS3P61009 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SPCS3P61009 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SPCS3P61009 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC12.82□□□□□ -0.36
SPCS3P61009 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
SPCS3P61009 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
SPCS3P61009 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
SPCS3P61009 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
SPCS3P61009 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SPCS3P61009 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
SPCS3P61009 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
SPCS3P61009 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SPCS3P61009 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SPCS3P61009 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SPCS3P61009 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC12.81□□□□□ -0.36
SPCS3P61009 LINC00552-201ENST00000625151 2579 ntBASIC12.81□□□□□ -0.36
SPCS3P61009 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
SPCS3P61009 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SPCS3P61009 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
SPCS3P61009 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SPCS3P61009 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SPCS3P61009 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SPCS3P61009 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SPCS3P61009 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SPCS3P61009 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC12.81□□□□□ -0.36
SPCS3P61009 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SPCS3P61009 AL691432.1-201ENST00000596308 1422 ntBASIC12.81□□□□□ -0.36
SPCS3P61009 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC12.81□□□□□ -0.36
SPCS3P61009 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SPCS3P61009 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SPCS3P61009 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SPCS3P61009 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SPCS3P61009 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
SPCS3P61009 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SPCS3P61009 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SPCS3P61009 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SPCS3P61009 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SPCS3P61009 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
SPCS3P61009 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
SPCS3P61009 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC12.81□□□□□ -0.36
SPCS3P61009 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SPCS3P61009 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
SPCS3P61009 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SPCS3P61009 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC12.81□□□□□ -0.36
SPCS3P61009 AC093909.1-201ENST00000504731 1122 ntBASIC12.81□□□□□ -0.36
SPCS3P61009 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
SPCS3P61009 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC12.81□□□□□ -0.36
SPCS3P61009 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC12.81□□□□□ -0.36
SPCS3P61009 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC12.81□□□□□ -0.36
SPCS3P61009 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
SPCS3P61009 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC12.81□□□□□ -0.36
SPCS3P61009 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC12.81□□□□□ -0.36
SPCS3P61009 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC12.81□□□□□ -0.36
SPCS3P61009 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC12.81□□□□□ -0.36
SPCS3P61009 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SPCS3P61009 AQP6-205ENST00000618286 829 ntTSL 5 BASIC12.81□□□□□ -0.36
SPCS3P61009 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
SPCS3P61009 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
SPCS3P61009 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms