Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NR1H2P55055 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
NR1H2P55055 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.93□□□□□ -0.02
NR1H2P55055 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NR1H2P55055 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NR1H2P55055 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.93□□□□□ -0.02
NR1H2P55055 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
NR1H2P55055 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
NR1H2P55055 AC092127.1-201ENST00000567093 3455 ntBASIC14.93□□□□□ -0.02
NR1H2P55055 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NR1H2P55055 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NR1H2P55055 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NR1H2P55055 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.93□□□□□ -0.02
NR1H2P55055 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
NR1H2P55055 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.93□□□□□ -0.02
NR1H2P55055 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NR1H2P55055 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NR1H2P55055 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NR1H2P55055 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
NR1H2P55055 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NR1H2P55055 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NR1H2P55055 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NR1H2P55055 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NR1H2P55055 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NR1H2P55055 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NR1H2P55055 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NR1H2P55055 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.93□□□□□ -0.02
NR1H2P55055 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NR1H2P55055 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.93□□□□□ -0.02
NR1H2P55055 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.93□□□□□ -0.02
NR1H2P55055 SNHG9-202ENST00000564014 471 ntBASIC14.93□□□□□ -0.02
NR1H2P55055 AC018845.2-201ENST00000568326 409 ntBASIC14.93□□□□□ -0.02
NR1H2P55055 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.93□□□□□ -0.02
NR1H2P55055 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
NR1H2P55055 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
NR1H2P55055 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NR1H2P55055 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NR1H2P55055 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NR1H2P55055 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NR1H2P55055 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
NR1H2P55055 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.93□□□□□ -0.02
NR1H2P55055 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC14.93□□□□□ -0.02
NR1H2P55055 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
NR1H2P55055 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
NR1H2P55055 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.93□□□□□ -0.02
NR1H2P55055 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.92□□□□□ -0.02
NR1H2P55055 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NR1H2P55055 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NR1H2P55055 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.92□□□□□ -0.02
NR1H2P55055 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NR1H2P55055 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.92□□□□□ -0.02
NR1H2P55055 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.92□□□□□ -0.02
NR1H2P55055 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.92□□□□□ -0.02
NR1H2P55055 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.92□□□□□ -0.02
NR1H2P55055 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.92□□□□□ -0.02
NR1H2P55055 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NR1H2P55055 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NR1H2P55055 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
NR1H2P55055 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NR1H2P55055 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NR1H2P55055 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NR1H2P55055 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
NR1H2P55055 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
NR1H2P55055 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
NR1H2P55055 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.92□□□□□ -0.02
NR1H2P55055 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.92□□□□□ -0.02
NR1H2P55055 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
NR1H2P55055 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.92□□□□□ -0.02
NR1H2P55055 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.92□□□□□ -0.02
NR1H2P55055 PDPK2P-202ENST00000562415 1191 ntBASIC14.92□□□□□ -0.02
NR1H2P55055 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.92□□□□□ -0.02
NR1H2P55055 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.92□□□□□ -0.02
NR1H2P55055 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NR1H2P55055 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
NR1H2P55055 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
NR1H2P55055 AC136759.1-202ENST00000530858 2194 ntBASIC14.92□□□□□ -0.02
NR1H2P55055 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.92□□□□□ -0.02
NR1H2P55055 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NR1H2P55055 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
NR1H2P55055 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.92□□□□□ -0.02
NR1H2P55055 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NR1H2P55055 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
NR1H2P55055 AL592424.1-201ENST00000563624 1536 ntBASIC14.92□□□□□ -0.02
NR1H2P55055 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
NR1H2P55055 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NR1H2P55055 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NR1H2P55055 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NR1H2P55055 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
NR1H2P55055 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.91□□□□□ -0.02
NR1H2P55055 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NR1H2P55055 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
NR1H2P55055 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NR1H2P55055 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.91□□□□□ -0.02
NR1H2P55055 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
NR1H2P55055 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.91□□□□□ -0.02
NR1H2P55055 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.91□□□□□ -0.02
NR1H2P55055 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NR1H2P55055 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.91□□□□□ -0.02
NR1H2P55055 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
NR1H2P55055 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms