Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLCN4P51793 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLCN4P51793 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.34■□□□□ 0.21
CLCN4P51793 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.34■□□□□ 0.21
CLCN4P51793 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CLCN4P51793 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.33■□□□□ 0.21
CLCN4P51793 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.33■□□□□ 0.21
CLCN4P51793 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.33■□□□□ 0.21
CLCN4P51793 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CLCN4P51793 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CLCN4P51793 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CLCN4P51793 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CLCN4P51793 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
CLCN4P51793 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLCN4P51793 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
CLCN4P51793 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
CLCN4P51793 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLCN4P51793 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLCN4P51793 RNU1-114P-201ENST00000365297 166 ntBASIC16.33■□□□□ 0.2
CLCN4P51793 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLCN4P51793 KLF2P2-201ENST00000416807 1039 ntBASIC16.33■□□□□ 0.2
CLCN4P51793 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC16.33■□□□□ 0.2
CLCN4P51793 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC16.33■□□□□ 0.2
CLCN4P51793 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC16.33■□□□□ 0.2
CLCN4P51793 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC16.33■□□□□ 0.2
CLCN4P51793 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC16.33■□□□□ 0.2
CLCN4P51793 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC16.33■□□□□ 0.2
CLCN4P51793 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC16.33■□□□□ 0.2
CLCN4P51793 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC16.33■□□□□ 0.2
CLCN4P51793 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC16.33■□□□□ 0.2
CLCN4P51793 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLCN4P51793 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.33■□□□□ 0.2
CLCN4P51793 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.33■□□□□ 0.2
CLCN4P51793 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLCN4P51793 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLCN4P51793 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLCN4P51793 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLCN4P51793 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLCN4P51793 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.33■□□□□ 0.2
CLCN4P51793 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CLCN4P51793 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC16.33■□□□□ 0.2
CLCN4P51793 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLCN4P51793 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CLCN4P51793 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLCN4P51793 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLCN4P51793 AL596087.1-201ENST00000400979 1969 ntBASIC16.33■□□□□ 0.2
CLCN4P51793 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CLCN4P51793 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLCN4P51793 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLCN4P51793 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CLCN4P51793 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLCN4P51793 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CLCN4P51793 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
CLCN4P51793 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN4P51793 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.32■□□□□ 0.2
CLCN4P51793 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN4P51793 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN4P51793 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN4P51793 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN4P51793 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN4P51793 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC16.32■□□□□ 0.2
CLCN4P51793 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN4P51793 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN4P51793 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN4P51793 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
CLCN4P51793 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN4P51793 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN4P51793 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN4P51793 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.32■□□□□ 0.2
CLCN4P51793 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN4P51793 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CLCN4P51793 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC16.32■□□□□ 0.2
CLCN4P51793 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN4P51793 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CLCN4P51793 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN4P51793 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN4P51793 MPV17-205ENST00000402310 906 ntTSL 5 BASIC16.32■□□□□ 0.2
CLCN4P51793 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN4P51793 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CLCN4P51793 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.32■□□□□ 0.2
CLCN4P51793 AC004945.1-201ENST00000416738 983 ntBASIC16.32■□□□□ 0.2
CLCN4P51793 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.32■□□□□ 0.2
CLCN4P51793 PCDH8P1-201ENST00000428983 2773 ntBASIC16.32■□□□□ 0.2
CLCN4P51793 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CLCN4P51793 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.32■□□□□ 0.2
CLCN4P51793 MTX1P1-201ENST00000440904 838 ntBASIC16.32■□□□□ 0.2
CLCN4P51793 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN4P51793 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC16.32■□□□□ 0.2
CLCN4P51793 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CLCN4P51793 ARTN-209ENST00000479128 471 ntTSL 3 BASIC16.32■□□□□ 0.2
CLCN4P51793 RPSAP36-202ENST00000494591 1261 ntBASIC16.32■□□□□ 0.2
CLCN4P51793 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN4P51793 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC16.32■□□□□ 0.2
CLCN4P51793 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN4P51793 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.32■□□□□ 0.2
CLCN4P51793 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN4P51793 EEF1DP1-201ENST00000585891 896 ntBASIC16.32■□□□□ 0.2
CLCN4P51793 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLCN4P51793 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC16.32■□□□□ 0.2
CLCN4P51793 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms