Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDK7P50613 FOS-202ENST00000535987 1402 ntTSL 2 BASIC17.2■□□□□ 0.34
CDK7P50613 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDK7P50613 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CDK7P50613 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDK7P50613 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDK7P50613 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDK7P50613 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDK7P50613 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.19■□□□□ 0.34
CDK7P50613 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.19■□□□□ 0.34
CDK7P50613 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.19■□□□□ 0.34
CDK7P50613 ME2P1-201ENST00000426028 1970 ntBASIC17.19■□□□□ 0.34
CDK7P50613 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDK7P50613 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.19■□□□□ 0.34
CDK7P50613 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
CDK7P50613 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CDK7P50613 AC018892.3-201ENST00000623986 2499 ntBASIC17.19■□□□□ 0.34
CDK7P50613 AC005052.1-201ENST00000625181 2492 ntBASIC17.19■□□□□ 0.34
CDK7P50613 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC17.19■□□□□ 0.34
CDK7P50613 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDK7P50613 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDK7P50613 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
CDK7P50613 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC17.19■□□□□ 0.34
CDK7P50613 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC17.19■□□□□ 0.34
CDK7P50613 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC17.19■□□□□ 0.34
CDK7P50613 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDK7P50613 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.19■□□□□ 0.34
CDK7P50613 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDK7P50613 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CDK7P50613 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDK7P50613 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
CDK7P50613 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDK7P50613 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDK7P50613 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CDK7P50613 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDK7P50613 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.19■□□□□ 0.34
CDK7P50613 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDK7P50613 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC17.19■□□□□ 0.34
CDK7P50613 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC17.19■□□□□ 0.34
CDK7P50613 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDK7P50613 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDK7P50613 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDK7P50613 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDK7P50613 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDK7P50613 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.18■□□□□ 0.34
CDK7P50613 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDK7P50613 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDK7P50613 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.18■□□□□ 0.34
CDK7P50613 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.18■□□□□ 0.34
CDK7P50613 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CDK7P50613 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDK7P50613 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.18■□□□□ 0.34
CDK7P50613 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDK7P50613 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDK7P50613 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CDK7P50613 MPV17-205ENST00000402310 906 ntTSL 5 BASIC17.18■□□□□ 0.34
CDK7P50613 ACTBP8-201ENST00000403258 1108 ntBASIC17.18■□□□□ 0.34
CDK7P50613 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC17.18■□□□□ 0.34
CDK7P50613 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC17.18■□□□□ 0.34
CDK7P50613 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC17.18■□□□□ 0.34
CDK7P50613 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDK7P50613 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC17.18■□□□□ 0.34
CDK7P50613 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC17.18■□□□□ 0.34
CDK7P50613 RERG-205ENST00000537647 935 ntTSL 2 BASIC17.18■□□□□ 0.34
CDK7P50613 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDK7P50613 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC17.18■□□□□ 0.34
CDK7P50613 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC17.18■□□□□ 0.34
CDK7P50613 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC17.18■□□□□ 0.34
CDK7P50613 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDK7P50613 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDK7P50613 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDK7P50613 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDK7P50613 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDK7P50613 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.18■□□□□ 0.34
CDK7P50613 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDK7P50613 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CDK7P50613 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDK7P50613 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CDK7P50613 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDK7P50613 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDK7P50613 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDK7P50613 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDK7P50613 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.17■□□□□ 0.34
CDK7P50613 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDK7P50613 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
CDK7P50613 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDK7P50613 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDK7P50613 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CDK7P50613 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDK7P50613 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CDK7P50613 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDK7P50613 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDK7P50613 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDK7P50613 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDK7P50613 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDK7P50613 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.17■□□□□ 0.34
CDK7P50613 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDK7P50613 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC17.17■□□□□ 0.34
CDK7P50613 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CDK7P50613 HNRNPA1P32-201ENST00000396326 963 ntBASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms