Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 EID1-202ENST00000560490 584 ntTSL 3 BASIC14.1□□□□□ -0.15
ATRXP46100 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ATRXP46100 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.1□□□□□ -0.15
ATRXP46100 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
ATRXP46100 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ATRXP46100 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
ATRXP46100 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ATRXP46100 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ATRXP46100 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ATRXP46100 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
ATRXP46100 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC14.1□□□□□ -0.15
ATRXP46100 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ATRXP46100 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.1□□□□□ -0.15
ATRXP46100 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC14.1□□□□□ -0.15
ATRXP46100 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ATRXP46100 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
ATRXP46100 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ATRXP46100 PLA2G2A-201ENST00000375111 970 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ATRXP46100 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ATRXP46100 KIR2DL4-207ENST00000396293 715 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ATRXP46100 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.09□□□□□ -0.15
ATRXP46100 KLF2P2-201ENST00000416807 1039 ntBASIC14.09□□□□□ -0.15
ATRXP46100 BX088651.3-201ENST00000418155 352 ntBASIC14.09□□□□□ -0.15
ATRXP46100 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC14.09□□□□□ -0.15
ATRXP46100 AC116345.2-201ENST00000512837 523 ntBASIC14.09□□□□□ -0.15
ATRXP46100 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
ATRXP46100 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC14.09□□□□□ -0.15
ATRXP46100 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC14.09□□□□□ -0.15
ATRXP46100 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC14.09□□□□□ -0.15
ATRXP46100 MIR4522-201ENST00000584932 87 ntBASIC14.09□□□□□ -0.15
ATRXP46100 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC14.09□□□□□ -0.15
ATRXP46100 AC006548.2-201ENST00000605217 529 ntBASIC14.09□□□□□ -0.15
ATRXP46100 ZACNP1-201ENST00000612259 710 ntBASIC14.09□□□□□ -0.15
ATRXP46100 AL450487.2-201ENST00000615934 407 ntBASIC14.09□□□□□ -0.15
ATRXP46100 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ATRXP46100 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ATRXP46100 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
ATRXP46100 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ATRXP46100 AL138799.1-201ENST00000448213 1675 ntBASIC14.09□□□□□ -0.15
ATRXP46100 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ATRXP46100 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ATRXP46100 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
ATRXP46100 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ATRXP46100 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
ATRXP46100 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ATRXP46100 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
ATRXP46100 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
ATRXP46100 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ATRXP46100 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ATRXP46100 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ATRXP46100 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.09□□□□□ -0.15
ATRXP46100 HFE-209ENST00000461397 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
ATRXP46100 MARK2P5-201ENST00000507649 634 ntBASIC14.09□□□□□ -0.15
ATRXP46100 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC14.09□□□□□ -0.15
ATRXP46100 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC14.09□□□□□ -0.15
ATRXP46100 AP005019.2-201ENST00000615104 511 ntBASIC14.09□□□□□ -0.15
ATRXP46100 AL512324.3-201ENST00000619383 882 ntBASIC14.09□□□□□ -0.15
ATRXP46100 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
ATRXP46100 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
ATRXP46100 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
ATRXP46100 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ATRXP46100 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
ATRXP46100 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ATRXP46100 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ATRXP46100 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ATRXP46100 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
ATRXP46100 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
ATRXP46100 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC14.09□□□□□ -0.15
ATRXP46100 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
ATRXP46100 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
ATRXP46100 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
ATRXP46100 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
ATRXP46100 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
ATRXP46100 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
ATRXP46100 RN7SKP214-201ENST00000364208 315 ntBASIC14.08□□□□□ -0.15
ATRXP46100 POM121L8P-201ENST00000417732 1281 ntBASIC14.08□□□□□ -0.15
ATRXP46100 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC14.08□□□□□ -0.15
ATRXP46100 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.08□□□□□ -0.15
ATRXP46100 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC14.08□□□□□ -0.15
ATRXP46100 TPM1-223ENST00000560445 485 ntTSL 3 BASIC14.08□□□□□ -0.15
ATRXP46100 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
ATRXP46100 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
ATRXP46100 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.08□□□□□ -0.16
ATRXP46100 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ATRXP46100 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ATRXP46100 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
ATRXP46100 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC14.08□□□□□ -0.16
ATRXP46100 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
ATRXP46100 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
ATRXP46100 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.08□□□□□ -0.16
ATRXP46100 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ATRXP46100 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ATRXP46100 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.08□□□□□ -0.16
ATRXP46100 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ATRXP46100 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.08□□□□□ -0.16
ATRXP46100 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
ATRXP46100 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
ATRXP46100 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
ATRXP46100 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
ATRXP46100 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms