Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC17.73■□□□□ 0.43
HOXA13P31271 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HOXA13P31271 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HOXA13P31271 AC084364.1-201ENST00000551967 1556 ntBASIC17.73■□□□□ 0.43
HOXA13P31271 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.73■□□□□ 0.43
HOXA13P31271 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
HOXA13P31271 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HOXA13P31271 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HOXA13P31271 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
HOXA13P31271 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HOXA13P31271 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HOXA13P31271 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HOXA13P31271 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HOXA13P31271 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HOXA13P31271 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.72■□□□□ 0.43
HOXA13P31271 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
HOXA13P31271 AC132872.4-202ENST00000622924 2756 ntBASIC17.72■□□□□ 0.43
HOXA13P31271 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.72■□□□□ 0.43
HOXA13P31271 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.72■□□□□ 0.43
HOXA13P31271 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
HOXA13P31271 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HOXA13P31271 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
HOXA13P31271 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC17.72■□□□□ 0.43
HOXA13P31271 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC17.72■□□□□ 0.43
HOXA13P31271 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC17.72■□□□□ 0.43
HOXA13P31271 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HOXA13P31271 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HOXA13P31271 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HOXA13P31271 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC17.72■□□□□ 0.43
HOXA13P31271 TEX30-203ENST00000376022 828 ntTSL 2 BASIC17.72■□□□□ 0.43
HOXA13P31271 MIR658-201ENST00000385210 100 ntBASIC17.72■□□□□ 0.43
HOXA13P31271 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC17.72■□□□□ 0.43
HOXA13P31271 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC17.72■□□□□ 0.43
HOXA13P31271 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC17.72■□□□□ 0.43
HOXA13P31271 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC17.72■□□□□ 0.43
HOXA13P31271 AC022210.1-201ENST00000449856 793 ntBASIC17.72■□□□□ 0.43
HOXA13P31271 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC17.72■□□□□ 0.43
HOXA13P31271 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC17.72■□□□□ 0.43
HOXA13P31271 AP001889.1-201ENST00000525414 633 ntBASIC17.72■□□□□ 0.43
HOXA13P31271 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
HOXA13P31271 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC17.72■□□□□ 0.43
HOXA13P31271 PTP4A1P2-201ENST00000546033 454 ntBASIC17.72■□□□□ 0.43
HOXA13P31271 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC17.72■□□□□ 0.43
HOXA13P31271 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC17.72■□□□□ 0.43
HOXA13P31271 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
HOXA13P31271 ATF5-205ENST00000600336 682 ntTSL 2 BASIC17.72■□□□□ 0.43
HOXA13P31271 AL359881.2-201ENST00000602973 570 ntBASIC17.72■□□□□ 0.43
HOXA13P31271 WNT11-204ENST00000621122 789 ntTSL 5 BASIC17.72■□□□□ 0.43
HOXA13P31271 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC17.72■□□□□ 0.43
HOXA13P31271 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
HOXA13P31271 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HOXA13P31271 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.72■□□□□ 0.43
HOXA13P31271 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
HOXA13P31271 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
HOXA13P31271 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HOXA13P31271 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
HOXA13P31271 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
HOXA13P31271 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HOXA13P31271 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.72■□□□□ 0.43
HOXA13P31271 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC17.72■□□□□ 0.43
HOXA13P31271 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
HOXA13P31271 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HOXA13P31271 TNRC18P3-201ENST00000441896 2691 ntBASIC17.72■□□□□ 0.43
HOXA13P31271 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC17.72■□□□□ 0.43
HOXA13P31271 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HOXA13P31271 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.71■□□□□ 0.43
HOXA13P31271 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HOXA13P31271 AL138799.1-201ENST00000448213 1675 ntBASIC17.71■□□□□ 0.43
HOXA13P31271 AGER-206ENST00000375070 1463 ntTSL 5 BASIC17.71■□□□□ 0.43
HOXA13P31271 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HOXA13P31271 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC17.71■□□□□ 0.43
HOXA13P31271 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HOXA13P31271 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HOXA13P31271 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HOXA13P31271 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
HOXA13P31271 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HOXA13P31271 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
HOXA13P31271 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HOXA13P31271 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC17.71■□□□□ 0.43
HOXA13P31271 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC17.71■□□□□ 0.43
HOXA13P31271 SUN1-204ENST00000403868 978 ntTSL 2 BASIC17.71■□□□□ 0.43
HOXA13P31271 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HOXA13P31271 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC17.71■□□□□ 0.43
HOXA13P31271 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
HOXA13P31271 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC17.71■□□□□ 0.43
HOXA13P31271 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HOXA13P31271 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC17.71■□□□□ 0.43
HOXA13P31271 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HOXA13P31271 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC17.71■□□□□ 0.43
HOXA13P31271 AP001063.1-201ENST00000568332 529 ntBASIC17.71■□□□□ 0.43
HOXA13P31271 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC17.71■□□□□ 0.43
HOXA13P31271 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
HOXA13P31271 MIR4259-201ENST00000584466 101 ntBASIC17.71■□□□□ 0.43
HOXA13P31271 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
HOXA13P31271 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HOXA13P31271 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
HOXA13P31271 AC105250.1-201ENST00000509378 2057 ntBASIC17.71■□□□□ 0.43
HOXA13P31271 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HOXA13P31271 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HOXA13P31271 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms