Protein–RNA interactions for Protein: P17302

GJA1, Gap junction alpha-1 protein, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GJA1P17302 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
GJA1P17302 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.15■□□□□ 0.18
GJA1P17302 AGER-214ENST00000538695 487 ntTSL 2 BASIC16.15■□□□□ 0.18
GJA1P17302 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC16.15■□□□□ 0.18
GJA1P17302 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.15■□□□□ 0.18
GJA1P17302 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC16.15■□□□□ 0.18
GJA1P17302 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
GJA1P17302 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
GJA1P17302 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
GJA1P17302 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GJA1P17302 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
GJA1P17302 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
GJA1P17302 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
GJA1P17302 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC16.15■□□□□ 0.18
GJA1P17302 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GJA1P17302 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GJA1P17302 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.15■□□□□ 0.18
GJA1P17302 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.15■□□□□ 0.18
GJA1P17302 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.15■□□□□ 0.18
GJA1P17302 AL138709.1-201ENST00000614840 1693 ntBASIC16.14■□□□□ 0.18
GJA1P17302 AC022188.1-201ENST00000620960 1664 ntBASIC16.14■□□□□ 0.18
GJA1P17302 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.18
GJA1P17302 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
GJA1P17302 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
GJA1P17302 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.14■□□□□ 0.17
GJA1P17302 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
GJA1P17302 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.14■□□□□ 0.17
GJA1P17302 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
GJA1P17302 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
GJA1P17302 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
GJA1P17302 AC008894.3-201ENST00000624324 3103 ntBASIC16.14■□□□□ 0.17
GJA1P17302 RNU1-114P-201ENST00000365297 166 ntBASIC16.14■□□□□ 0.17
GJA1P17302 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
GJA1P17302 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
GJA1P17302 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
GJA1P17302 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC16.14■□□□□ 0.17
GJA1P17302 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC16.14■□□□□ 0.17
GJA1P17302 CD74-212ENST00000524315 584 ntTSL 5 BASIC16.14■□□□□ 0.17
GJA1P17302 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC16.14■□□□□ 0.17
GJA1P17302 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.14■□□□□ 0.17
GJA1P17302 AC243960.2-201ENST00000600996 747 ntBASIC16.14■□□□□ 0.17
GJA1P17302 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC16.14■□□□□ 0.17
GJA1P17302 AC091271.1-201ENST00000611877 1162 ntBASIC16.14■□□□□ 0.17
GJA1P17302 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
GJA1P17302 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
GJA1P17302 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
GJA1P17302 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
GJA1P17302 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
GJA1P17302 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.14■□□□□ 0.17
GJA1P17302 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.14■□□□□ 0.17
GJA1P17302 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.14■□□□□ 0.17
GJA1P17302 AL133338.1-201ENST00000565695 1517 ntBASIC16.14■□□□□ 0.17
GJA1P17302 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
GJA1P17302 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
GJA1P17302 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
GJA1P17302 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
GJA1P17302 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
GJA1P17302 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
GJA1P17302 AC020907.1-201ENST00000616460 1350 ntBASIC16.13■□□□□ 0.17
GJA1P17302 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
GJA1P17302 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.13■□□□□ 0.17
GJA1P17302 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
GJA1P17302 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
GJA1P17302 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.13■□□□□ 0.17
GJA1P17302 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
GJA1P17302 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
GJA1P17302 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
GJA1P17302 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
GJA1P17302 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
GJA1P17302 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.13■□□□□ 0.17
GJA1P17302 NME6-203ENST00000415644 849 ntTSL 2 BASIC16.13■□□□□ 0.17
GJA1P17302 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
GJA1P17302 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.13■□□□□ 0.17
GJA1P17302 PFN1P12-201ENST00000455938 534 ntBASIC16.13■□□□□ 0.17
GJA1P17302 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC16.13■□□□□ 0.17
GJA1P17302 ZNF767P-206ENST00000513792 565 ntBASIC16.13■□□□□ 0.17
GJA1P17302 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
GJA1P17302 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
GJA1P17302 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
GJA1P17302 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC16.13■□□□□ 0.17
GJA1P17302 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC16.13■□□□□ 0.17
GJA1P17302 MIR4741-201ENST00000579822 90 ntBASIC16.13■□□□□ 0.17
GJA1P17302 ABBA01031663.1-201ENST00000635630 790 ntBASIC16.13■□□□□ 0.17
GJA1P17302 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
GJA1P17302 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
GJA1P17302 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
GJA1P17302 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
GJA1P17302 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
GJA1P17302 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
GJA1P17302 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
GJA1P17302 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC16.13■□□□□ 0.17
GJA1P17302 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.13■□□□□ 0.17
GJA1P17302 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.13■□□□□ 0.17
GJA1P17302 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.13■□□□□ 0.17
GJA1P17302 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
GJA1P17302 PRAL-201ENST00000624952 3286 ntBASIC16.13■□□□□ 0.17
GJA1P17302 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.13■□□□□ 0.17
GJA1P17302 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GJA1P17302 AC112504.1-201ENST00000623415 1841 ntBASIC16.12■□□□□ 0.17
GJA1P17302 AC024909.3-201ENST00000611513 2257 ntBASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms