Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
RARAP10276 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.43■□□□□ 0.22
RARAP10276 AL645939.2-201ENST00000427340 991 ntBASIC16.43■□□□□ 0.22
RARAP10276 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RARAP10276 TARDBPP1-201ENST00000442013 1203 ntBASIC16.43■□□□□ 0.22
RARAP10276 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
RARAP10276 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RARAP10276 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.43■□□□□ 0.22
RARAP10276 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.43■□□□□ 0.22
RARAP10276 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.43■□□□□ 0.22
RARAP10276 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.43■□□□□ 0.22
RARAP10276 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.43■□□□□ 0.22
RARAP10276 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.43■□□□□ 0.22
RARAP10276 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.43■□□□□ 0.22
RARAP10276 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RARAP10276 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC16.43■□□□□ 0.22
RARAP10276 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RARAP10276 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RARAP10276 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RARAP10276 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RARAP10276 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
RARAP10276 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RARAP10276 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.43■□□□□ 0.22
RARAP10276 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RARAP10276 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC16.43■□□□□ 0.22
RARAP10276 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RARAP10276 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC16.43■□□□□ 0.22
RARAP10276 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
RARAP10276 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
RARAP10276 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RARAP10276 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC16.43■□□□□ 0.22
RARAP10276 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.43■□□□□ 0.22
RARAP10276 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RARAP10276 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RARAP10276 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RARAP10276 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.42■□□□□ 0.22
RARAP10276 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RARAP10276 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RARAP10276 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RARAP10276 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RARAP10276 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RARAP10276 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
RARAP10276 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RARAP10276 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RARAP10276 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RARAP10276 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RARAP10276 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RARAP10276 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
RARAP10276 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC16.42■□□□□ 0.22
RARAP10276 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.42■□□□□ 0.22
RARAP10276 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RARAP10276 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
RARAP10276 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.42■□□□□ 0.22
RARAP10276 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RARAP10276 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.42■□□□□ 0.22
RARAP10276 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
RARAP10276 AC004449.1-201ENST00000564240 433 ntBASIC16.42■□□□□ 0.22
RARAP10276 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RARAP10276 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.42■□□□□ 0.22
RARAP10276 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RARAP10276 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
RARAP10276 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RARAP10276 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
RARAP10276 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
RARAP10276 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.42■□□□□ 0.22
RARAP10276 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RARAP10276 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RARAP10276 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RARAP10276 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.42■□□□□ 0.22
RARAP10276 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RARAP10276 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RARAP10276 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RARAP10276 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RARAP10276 TUBB3P1-201ENST00000405796 1332 ntBASIC16.42■□□□□ 0.22
RARAP10276 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RARAP10276 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.42■□□□□ 0.22
RARAP10276 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
RARAP10276 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RARAP10276 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.42■□□□□ 0.22
RARAP10276 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.42■□□□□ 0.22
RARAP10276 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.42■□□□□ 0.22
RARAP10276 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RARAP10276 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RARAP10276 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
RARAP10276 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC16.41■□□□□ 0.22
RARAP10276 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RARAP10276 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.41■□□□□ 0.22
RARAP10276 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.41■□□□□ 0.22
RARAP10276 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RARAP10276 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.41■□□□□ 0.22
RARAP10276 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
RARAP10276 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.41■□□□□ 0.22
RARAP10276 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.41■□□□□ 0.22
RARAP10276 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.41■□□□□ 0.22
RARAP10276 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RARAP10276 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RARAP10276 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RARAP10276 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.41■□□□□ 0.22
RARAP10276 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.41■□□□□ 0.22
RARAP10276 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms