Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CD48P09326 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CD48P09326 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CD48P09326 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
CD48P09326 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CD48P09326 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CD48P09326 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CD48P09326 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.18
CD48P09326 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CD48P09326 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.2■□□□□ 0.18
CD48P09326 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.2■□□□□ 0.18
CD48P09326 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CD48P09326 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.2■□□□□ 0.18
CD48P09326 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CD48P09326 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CD48P09326 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.2■□□□□ 0.18
CD48P09326 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CD48P09326 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CD48P09326 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CD48P09326 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.2■□□□□ 0.18
CD48P09326 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CD48P09326 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CD48P09326 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CD48P09326 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CD48P09326 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.2■□□□□ 0.18
CD48P09326 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CD48P09326 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CD48P09326 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CD48P09326 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CD48P09326 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CD48P09326 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.2■□□□□ 0.18
CD48P09326 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.2■□□□□ 0.18
CD48P09326 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.2■□□□□ 0.18
CD48P09326 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CD48P09326 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.2■□□□□ 0.18
CD48P09326 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.2■□□□□ 0.18
CD48P09326 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CD48P09326 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.2■□□□□ 0.18
CD48P09326 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.2■□□□□ 0.18
CD48P09326 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.2■□□□□ 0.18
CD48P09326 AC074044.1-201ENST00000609673 707 ntBASIC16.2■□□□□ 0.18
CD48P09326 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.2■□□□□ 0.18
CD48P09326 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CD48P09326 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CD48P09326 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CD48P09326 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CD48P09326 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.2■□□□□ 0.18
CD48P09326 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CD48P09326 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CD48P09326 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CD48P09326 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CD48P09326 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CD48P09326 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CD48P09326 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CD48P09326 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CD48P09326 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CD48P09326 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CD48P09326 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD48P09326 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CD48P09326 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD48P09326 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD48P09326 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD48P09326 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
CD48P09326 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.19■□□□□ 0.18
CD48P09326 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD48P09326 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CD48P09326 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CD48P09326 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD48P09326 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CD48P09326 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.19■□□□□ 0.18
CD48P09326 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.19■□□□□ 0.18
CD48P09326 AC015922.1-201ENST00000421102 1152 ntBASIC16.19■□□□□ 0.18
CD48P09326 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.19■□□□□ 0.18
CD48P09326 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.19■□□□□ 0.18
CD48P09326 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CD48P09326 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.19■□□□□ 0.18
CD48P09326 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.19■□□□□ 0.18
CD48P09326 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.19■□□□□ 0.18
CD48P09326 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CD48P09326 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.19■□□□□ 0.18
CD48P09326 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.19■□□□□ 0.18
CD48P09326 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CD48P09326 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.19■□□□□ 0.18
CD48P09326 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CD48P09326 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD48P09326 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CD48P09326 CICP24-201ENST00000605464 2705 ntBASIC16.19■□□□□ 0.18
CD48P09326 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD48P09326 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.19■□□□□ 0.18
CD48P09326 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD48P09326 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CD48P09326 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CD48P09326 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CD48P09326 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CD48P09326 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD48P09326 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CD48P09326 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD48P09326 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CD48P09326 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.19■□□□□ 0.18
CD48P09326 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms