Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SNX4O95219 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SNX4O95219 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
SNX4O95219 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SNX4O95219 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SNX4O95219 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.79□□□□□ -0.04
SNX4O95219 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SNX4O95219 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
SNX4O95219 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SNX4O95219 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SNX4O95219 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.79□□□□□ -0.04
SNX4O95219 MTND6P24-201ENST00000440466 518 ntBASIC14.79□□□□□ -0.04
SNX4O95219 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.79□□□□□ -0.04
SNX4O95219 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SNX4O95219 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
SNX4O95219 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.79□□□□□ -0.04
SNX4O95219 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SNX4O95219 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.79□□□□□ -0.04
SNX4O95219 AC097493.3-201ENST00000509725 367 ntBASIC14.79□□□□□ -0.04
SNX4O95219 AC027369.6-201ENST00000525520 931 ntBASIC14.79□□□□□ -0.04
SNX4O95219 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.79□□□□□ -0.04
SNX4O95219 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.79□□□□□ -0.04
SNX4O95219 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.79□□□□□ -0.04
SNX4O95219 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SNX4O95219 REXO1L8P-201ENST00000604378 1897 ntBASIC14.79□□□□□ -0.04
SNX4O95219 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SNX4O95219 PCDHA3-202ENST00000532566 4594 ntBASIC14.79□□□□□ -0.04
SNX4O95219 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SNX4O95219 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
SNX4O95219 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SNX4O95219 AC104581.4-201ENST00000623126 3052 ntBASIC14.79□□□□□ -0.04
SNX4O95219 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SNX4O95219 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SNX4O95219 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SNX4O95219 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.79□□□□□ -0.04
SNX4O95219 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.78□□□□□ -0.04
SNX4O95219 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SNX4O95219 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SNX4O95219 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SNX4O95219 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.78□□□□□ -0.04
SNX4O95219 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SNX4O95219 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
SNX4O95219 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.78□□□□□ -0.04
SNX4O95219 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SNX4O95219 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SNX4O95219 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SNX4O95219 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SNX4O95219 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SNX4O95219 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SNX4O95219 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.78□□□□□ -0.04
SNX4O95219 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SNX4O95219 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SNX4O95219 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SNX4O95219 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SNX4O95219 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SNX4O95219 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SNX4O95219 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.78□□□□□ -0.04
SNX4O95219 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.78□□□□□ -0.04
SNX4O95219 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.78□□□□□ -0.04
SNX4O95219 HMGN1P19-201ENST00000436976 333 ntBASIC14.78□□□□□ -0.04
SNX4O95219 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SNX4O95219 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.78□□□□□ -0.04
SNX4O95219 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.78□□□□□ -0.04
SNX4O95219 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.78□□□□□ -0.04
SNX4O95219 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.78□□□□□ -0.04
SNX4O95219 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.78□□□□□ -0.04
SNX4O95219 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.78□□□□□ -0.04
SNX4O95219 AC005498.2-205ENST00000593218 784 ntBASIC14.78□□□□□ -0.04
SNX4O95219 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.78□□□□□ -0.04
SNX4O95219 AL589739.1-201ENST00000607720 493 ntBASIC14.78□□□□□ -0.04
SNX4O95219 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SNX4O95219 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SNX4O95219 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SNX4O95219 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.78□□□□□ -0.04
SNX4O95219 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SNX4O95219 AL359258.3-201ENST00000622910 2331 ntBASIC14.78□□□□□ -0.04
SNX4O95219 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
SNX4O95219 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SNX4O95219 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SNX4O95219 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SNX4O95219 CICP4-201ENST00000447359 2812 ntBASIC14.78□□□□□ -0.04
SNX4O95219 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SNX4O95219 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SNX4O95219 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.77□□□□□ -0.04
SNX4O95219 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.77□□□□□ -0.04
SNX4O95219 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.04
SNX4O95219 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SNX4O95219 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SNX4O95219 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SNX4O95219 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SNX4O95219 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SNX4O95219 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SNX4O95219 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
SNX4O95219 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.77□□□□□ -0.04
SNX4O95219 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
SNX4O95219 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SNX4O95219 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SNX4O95219 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SNX4O95219 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.77□□□□□ -0.04
SNX4O95219 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms