Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LTN1O94822 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
LTN1O94822 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC20.22■□□□□ 0.83
LTN1O94822 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC20.22■□□□□ 0.83
LTN1O94822 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
LTN1O94822 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
LTN1O94822 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
LTN1O94822 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LTN1O94822 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LTN1O94822 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LTN1O94822 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
LTN1O94822 UFM1-202ENST00000379649 846 ntTSL 4 BASIC20.22■□□□□ 0.83
LTN1O94822 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC20.22■□□□□ 0.83
LTN1O94822 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC20.22■□□□□ 0.83
LTN1O94822 MIR4706-201ENST00000582134 82 ntBASIC20.22■□□□□ 0.83
LTN1O94822 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LTN1O94822 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LTN1O94822 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
LTN1O94822 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC20.22■□□□□ 0.83
LTN1O94822 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC20.22■□□□□ 0.83
LTN1O94822 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LTN1O94822 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC20.22■□□□□ 0.83
LTN1O94822 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LTN1O94822 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC20.22■□□□□ 0.83
LTN1O94822 PRORSD1P-202ENST00000563365 2154 ntBASIC20.22■□□□□ 0.83
LTN1O94822 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LTN1O94822 AL359258.3-201ENST00000622910 2331 ntBASIC20.22■□□□□ 0.83
LTN1O94822 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
LTN1O94822 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LTN1O94822 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
LTN1O94822 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LTN1O94822 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LTN1O94822 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
LTN1O94822 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC20.21■□□□□ 0.83
LTN1O94822 AC125604.1-201ENST00000496255 707 ntBASIC20.21■□□□□ 0.83
LTN1O94822 AC024681.1-201ENST00000521917 487 ntBASIC20.21■□□□□ 0.83
LTN1O94822 AC009779.1-201ENST00000551138 283 ntBASIC20.21■□□□□ 0.83
LTN1O94822 AL133499.1-201ENST00000596207 608 ntBASIC20.21■□□□□ 0.83
LTN1O94822 AC128714.1-201ENST00000637035 887 ntBASIC20.21■□□□□ 0.83
LTN1O94822 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
LTN1O94822 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LTN1O94822 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
LTN1O94822 CICP13-201ENST00000422015 2789 ntBASIC20.21■□□□□ 0.83
LTN1O94822 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LTN1O94822 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LTN1O94822 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LTN1O94822 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LTN1O94822 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LTN1O94822 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LTN1O94822 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LTN1O94822 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LTN1O94822 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LTN1O94822 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC20.21■□□□□ 0.83
LTN1O94822 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC20.21■□□□□ 0.83
LTN1O94822 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LTN1O94822 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC20.21■□□□□ 0.83
LTN1O94822 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC20.21■□□□□ 0.83
LTN1O94822 HLA-J-204ENST00000495278 958 ntBASIC20.21■□□□□ 0.83
LTN1O94822 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC20.21■□□□□ 0.83
LTN1O94822 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC20.21■□□□□ 0.83
LTN1O94822 SPCS2P2-201ENST00000603270 608 ntBASIC20.21■□□□□ 0.83
LTN1O94822 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC20.21■□□□□ 0.83
LTN1O94822 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.21■□□□□ 0.83
LTN1O94822 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LTN1O94822 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
LTN1O94822 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LTN1O94822 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
LTN1O94822 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC20.2■□□□□ 0.82
LTN1O94822 AL138725.1-201ENST00000407347 1314 ntBASIC20.2■□□□□ 0.82
LTN1O94822 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LTN1O94822 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LTN1O94822 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
LTN1O94822 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC20.2■□□□□ 0.82
LTN1O94822 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
LTN1O94822 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LTN1O94822 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LTN1O94822 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC20.2■□□□□ 0.82
LTN1O94822 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC20.2■□□□□ 0.82
LTN1O94822 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
LTN1O94822 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.2■□□□□ 0.82
LTN1O94822 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LTN1O94822 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LTN1O94822 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LTN1O94822 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
LTN1O94822 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LTN1O94822 AC005740.2-201ENST00000511085 419 ntBASIC20.2■□□□□ 0.82
LTN1O94822 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
LTN1O94822 EID1-202ENST00000560490 584 ntTSL 3 BASIC20.2■□□□□ 0.82
LTN1O94822 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC20.2■□□□□ 0.82
LTN1O94822 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC20.2■□□□□ 0.82
LTN1O94822 ZBTB45P1-201ENST00000452761 1456 ntBASIC20.2■□□□□ 0.82
LTN1O94822 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC20.2■□□□□ 0.82
LTN1O94822 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
LTN1O94822 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC20.2■□□□□ 0.82
LTN1O94822 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC20.19■□□□□ 0.82
LTN1O94822 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LTN1O94822 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LTN1O94822 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LTN1O94822 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC20.19■□□□□ 0.82
LTN1O94822 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms