Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.67□□□□□ -0.06
TRIM3O75382 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM3O75382 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.67□□□□□ -0.06
TRIM3O75382 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM3O75382 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.67□□□□□ -0.06
TRIM3O75382 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM3O75382 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM3O75382 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM3O75382 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM3O75382 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
TRIM3O75382 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM3O75382 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM3O75382 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
TRIM3O75382 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM3O75382 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM3O75382 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM3O75382 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM3O75382 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM3O75382 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM3O75382 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM3O75382 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.66□□□□□ -0.06
TRIM3O75382 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.66□□□□□ -0.06
TRIM3O75382 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.66□□□□□ -0.06
TRIM3O75382 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM3O75382 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.66□□□□□ -0.06
TRIM3O75382 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.66□□□□□ -0.06
TRIM3O75382 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.66□□□□□ -0.06
TRIM3O75382 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.66□□□□□ -0.06
TRIM3O75382 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.66□□□□□ -0.06
TRIM3O75382 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.66□□□□□ -0.06
TRIM3O75382 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
TRIM3O75382 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM3O75382 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM3O75382 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.66□□□□□ -0.06
TRIM3O75382 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM3O75382 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM3O75382 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM3O75382 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM3O75382 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM3O75382 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM3O75382 AC004987.2-201ENST00000395959 1148 ntBASIC14.66□□□□□ -0.06
TRIM3O75382 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.66□□□□□ -0.06
TRIM3O75382 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM3O75382 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.66□□□□□ -0.06
TRIM3O75382 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM3O75382 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
TRIM3O75382 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.66□□□□□ -0.06
TRIM3O75382 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.66□□□□□ -0.06
TRIM3O75382 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.66□□□□□ -0.06
TRIM3O75382 SERBP1P3-201ENST00000459980 809 ntBASIC14.66□□□□□ -0.06
TRIM3O75382 ZNF890P-202ENST00000530367 1156 ntBASIC14.66□□□□□ -0.06
TRIM3O75382 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM3O75382 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM3O75382 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.66□□□□□ -0.06
TRIM3O75382 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.66□□□□□ -0.06
TRIM3O75382 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM3O75382 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM3O75382 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM3O75382 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM3O75382 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM3O75382 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.66□□□□□ -0.06
TRIM3O75382 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.66□□□□□ -0.06
TRIM3O75382 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM3O75382 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.66□□□□□ -0.06
TRIM3O75382 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM3O75382 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM3O75382 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM3O75382 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM3O75382 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.66□□□□□ -0.06
TRIM3O75382 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM3O75382 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.66□□□□□ -0.06
TRIM3O75382 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
TRIM3O75382 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.65□□□□□ -0.06
TRIM3O75382 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.65□□□□□ -0.06
TRIM3O75382 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM3O75382 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM3O75382 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.65□□□□□ -0.06
TRIM3O75382 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.65□□□□□ -0.06
TRIM3O75382 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM3O75382 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
TRIM3O75382 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM3O75382 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM3O75382 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.65□□□□□ -0.06
TRIM3O75382 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM3O75382 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
TRIM3O75382 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.65□□□□□ -0.06
TRIM3O75382 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM3O75382 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.65□□□□□ -0.06
TRIM3O75382 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.65□□□□□ -0.06
TRIM3O75382 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM3O75382 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM3O75382 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM3O75382 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.65□□□□□ -0.06
TRIM3O75382 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC14.65□□□□□ -0.06
TRIM3O75382 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.65□□□□□ -0.06
TRIM3O75382 AL512361.1-201ENST00000554200 418 ntBASIC14.65□□□□□ -0.06
TRIM3O75382 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.65□□□□□ -0.06
TRIM3O75382 AC243562.2-201ENST00000561247 970 ntBASIC14.65□□□□□ -0.06
TRIM3O75382 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.65□□□□□ -0.06
TRIM3O75382 AC009407.1-201ENST00000568958 598 ntBASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms