Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC18.16■□□□□ 0.5
CTNND1O60716 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTNND1O60716 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC18.15■□□□□ 0.5
CTNND1O60716 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC18.15■□□□□ 0.5
CTNND1O60716 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC18.15■□□□□ 0.5
CTNND1O60716 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CTNND1O60716 AC069224.1-201ENST00000566372 1715 ntBASIC18.15■□□□□ 0.5
CTNND1O60716 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CTNND1O60716 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC18.15■□□□□ 0.5
CTNND1O60716 ACE-204ENST00000428043 5120 ntTSL 2 BASIC18.15■□□□□ 0.5
CTNND1O60716 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
CTNND1O60716 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CTNND1O60716 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTNND1O60716 RPS3-201ENST00000278572 907 ntTSL 3 BASIC18.15■□□□□ 0.5
CTNND1O60716 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CTNND1O60716 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CTNND1O60716 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC18.15■□□□□ 0.5
CTNND1O60716 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC18.15■□□□□ 0.5
CTNND1O60716 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC18.15■□□□□ 0.5
CTNND1O60716 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
CTNND1O60716 HOMER2P2-201ENST00000451621 847 ntBASIC18.15■□□□□ 0.5
CTNND1O60716 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CTNND1O60716 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC18.15■□□□□ 0.5
CTNND1O60716 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CTNND1O60716 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC18.15■□□□□ 0.5
CTNND1O60716 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CTNND1O60716 RN7SL48P-201ENST00000579283 293 ntBASIC18.15■□□□□ 0.5
CTNND1O60716 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTNND1O60716 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC18.15■□□□□ 0.5
CTNND1O60716 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CTNND1O60716 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC18.15■□□□□ 0.5
CTNND1O60716 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTNND1O60716 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.15■□□□□ 0.5
CTNND1O60716 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CTNND1O60716 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTNND1O60716 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTNND1O60716 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTNND1O60716 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTNND1O60716 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CTNND1O60716 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC18.15■□□□□ 0.5
CTNND1O60716 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTNND1O60716 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CTNND1O60716 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC18.15■□□□□ 0.5
CTNND1O60716 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTNND1O60716 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CTNND1O60716 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CTNND1O60716 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
CTNND1O60716 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CTNND1O60716 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
CTNND1O60716 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CTNND1O60716 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CTNND1O60716 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CTNND1O60716 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
CTNND1O60716 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CTNND1O60716 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC18.14■□□□□ 0.49
CTNND1O60716 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CTNND1O60716 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CTNND1O60716 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CTNND1O60716 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.14■□□□□ 0.49
CTNND1O60716 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CTNND1O60716 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CTNND1O60716 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CTNND1O60716 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CTNND1O60716 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CTNND1O60716 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CTNND1O60716 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CTNND1O60716 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC18.14■□□□□ 0.49
CTNND1O60716 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC18.14■□□□□ 0.49
CTNND1O60716 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CTNND1O60716 ACR-203ENST00000529621 708 ntTSL 5 BASIC18.14■□□□□ 0.49
CTNND1O60716 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC18.14■□□□□ 0.49
CTNND1O60716 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CTNND1O60716 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CTNND1O60716 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CTNND1O60716 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CTNND1O60716 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CTNND1O60716 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CTNND1O60716 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CTNND1O60716 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CTNND1O60716 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC18.14■□□□□ 0.49
CTNND1O60716 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CTNND1O60716 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CTNND1O60716 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTNND1O60716 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTNND1O60716 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CTNND1O60716 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC18.13■□□□□ 0.49
CTNND1O60716 DOC2GP-204ENST00000639052 2548 ntBASIC18.13■□□□□ 0.49
CTNND1O60716 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTNND1O60716 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTNND1O60716 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTNND1O60716 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTNND1O60716 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CTNND1O60716 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CTNND1O60716 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC18.13■□□□□ 0.49
CTNND1O60716 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CTNND1O60716 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC18.13■□□□□ 0.49
CTNND1O60716 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTNND1O60716 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CTNND1O60716 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CTNND1O60716 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms